Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1487 ATGATGATTTTGATGACACTCGAACTCCACCTTCAATTCCTCTTCACTCAGAACCCCAATAACACCAACCCAATCCCAAAACCCTACCAAAACCCTAATTTCAACCCTAGAAACCAAAATGCCCAATTCCGACCCATTTCCATCGCCCAATTTTCCCGGGAAACAAACACCCCTTCCACCTCCGATCGAGGCCTCATTTTCCGAGAAAAAGTCCTCTACCTCGAGAAACTCAACGTGAACCCCAAAAAGGCCTTCAGAGTAAACCCTAACCTCCGGTCCACACCTCTCTCCACTCTCAAATCCGTAGAACAATGCCTCTCGTCCATGGGAATCGCCCGTTCCGCCATGGGAAGAATCCTCGACATGCTCCCGGACATCCTCAACCGCGACCCAAACACCGATCTCTACCCAATCCTCGATTTCCTCCTCAACGAGGTCGGAATCCCTTACCCCAATATCCGAAAATCGATTACGCGGTGCCCTAGGATCTTGGTCTGCAACGTGGAGAATCAATTGAGGCCAACGCTCTGTTTCCTGAAGGAATTAGGGTTCACTGGTGCGAATTCCCTCACGTGCCAGAACACGGTTCTTCTCGTTTCGAGTGTGGAAGGAACATTACTGCCCAAAATCGAGTTTTTAAAGAGTTTAGGGCTCACGCATAAGGAGGTGAAATACATGGTTTTGAGGTCCCCTGGGTTGTTAACTTTTAGCATTGAGAATAATCTGAGGCCGAAAATTGAGTATTTCTTGAAGGAGATGAATGGGGATATTTCGGAATTGAAGAGGTTTCCGCAGTATTTTTCGTTTAGCTTGGAAGGTAGGATTAAGCCGAGGCATAGTGTTCTGGTTCAGCATGGTTTGAGCCTCCCTTTGCACCTCATGTTGATGGGTGATGATGGTGGGTTTTATGAGACACTGTTCAACACGCGGTTGAGGAAACTTGATGGAAGGTAG 954 0.4769 MMILMTLELHLQFLFTQNPNNTNPIPKPYQNPNFNPRNQNAQFRPISIAQFSRETNTPSTSDRGLIFREKVLYLEKLNVNPKKAFRVNPNLRSTPLSTLKSVEQCLSSMGIARSAMGRILDMLPDILNRDPNTDLYPILDFLLNEVGIPYPNIRKSITRCPRILVCNVENQLRPTLCFLKELGFTGANSLTCQNTVLLVSSVEGTLLPKIEFLKSLGLTHKEVKYMVLRSPGLLTFSIENNLRPKIEYFLKEMNGDISELKRFPQYFSFSLEGRIKPRHSVLVQHGLSLPLHLMLMGDDGGFYETLFNTRLRKLDGR* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1487 317 SMART mt_12 257 288 IPR003690 GO:0003690|GO:0006355
Aev05g1487 317 SMART mt_12 154 185 IPR003690 GO:0003690|GO:0006355
Aev05g1487 317 SMART mt_12 224 256 IPR003690 GO:0003690|GO:0006355
Aev05g1487 317 SMART mt_12 117 149 IPR003690 GO:0003690|GO:0006355
Aev05g1487 317 SMART mt_12 82 112 IPR003690 GO:0003690|GO:0006355
Aev05g1487 317 SMART mt_12 188 219 IPR003690 GO:0003690|GO:0006355
Aev05g1487 317 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 48 315 - -
Aev05g1487 317 Pfam mTERF 97 185 IPR003690 GO:0003690|GO:0006355
Aev05g1487 317 Pfam mTERF 145 300 IPR003690 GO:0003690|GO:0006355
Aev05g1487 317 Gene3D Transcription termination factor 3, mitochondrial 82 314 IPR038538 -
Aev05g1487 317 PANTHER CGI-12 PROTEIN-RELATED 48 315 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1487 Aev-Chr5 11149944 11150897 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev05g1487 mTERF 4.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1487 K15032 - jre:109009265 359.377