Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1486 ATGAAGTCATTGCCACCACAAAGCATTGCACACTCTCCTCAACATCAAGAAAATCCAAATGGCCTCATTTGTTACCCTTTTACCACTCCCTCATCATCTTTTTATTCTTCTTCTCATTCTCAATCTCCTTCAATTGGAATTGTCAATGCAGATATAGGATCTCTCTCCCTTAACTCCAACCATAATGTAGTTTCACTTTCACCCCTTTCTTCATCTCTTGAGGCTAGTAATTATCACTCTGCCATGGAAAATGTGAGCACAAGCTTGACTTTTCCATTTATGAGGAGAGAATGCCTTTCTTGTAGAGCTGATGATGATGATGAAGATGTGGAGGGTAATAATAATAATAAAGGTTCTGATTTCAGTGAAAAAATCAACCATGATGCAAACTTGAACCAAGAGAATCATAATGATGAGAATTCTGTCAAAGAAATAGATAATGAAGAATCCAAACTCTGTTCAAGAGGGCATTGGAGACCTGCAGAAGATTCCAAGCTGAAGGAACTTGTTGCTCTTTATGGCCCTCAGAATTGGAACCTCATAGCTGAGAAGCTAGAAGGAAGATCAGGTCTAAAACTAGTGCAAATCACTCCTTCCATTCAATTTTTGCATGTCTACTCTCAGAAAAGTAGAGATAGAATGCTACATTGA 651 0.3825 MKSLPPQSIAHSPQHQENPNGLICYPFTTPSSSFYSSSHSQSPSIGIVNADIGSLSLNSNHNVVSLSPLSSSLEASNYHSAMENVSTSLTFPFMRRECLSCRADDDDEDVEGNNNNKGSDFSEKINHDANLNQENHNDENSVKEIDNEESKLCSRGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGLKLVQITPSIQFLHVYSQKSRDRMLH* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1486 216 PANTHER MYB TRANSCRIPTION FACTOR 46 190 - -
Aev05g1486 216 CDD SANT 158 195 IPR001005 -
Aev05g1486 216 Gene3D - 147 196 - -
Aev05g1486 216 MobiDBLite consensus disorder prediction 1 21 - -
Aev05g1486 216 SUPERFAMILY Homeodomain-like 152 192 IPR009057 -
Aev05g1486 216 SMART sant 154 208 IPR001005 -
Aev05g1486 216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 155 190 IPR017930 -
Aev05g1486 216 MobiDBLite consensus disorder prediction 104 124 - -
Aev05g1486 216 ProSiteProfiles Myb-like domain profile. 155 190 IPR001005 -
Aev05g1486 216 PANTHER MYB PROTEIN-RELATED 46 190 - -
Aev05g1486 216 Pfam Myb-like DNA-binding domain 155 190 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1486 Aev-Chr5 11136098 11136748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1486 135 190 MYB Transcription Factor Family AT1G69560 64.286 7.87e-19 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev05g1486 Myb_DNA-binding 2.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1486 K09422 - gmx:100804537 127.102