Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1480 ATGGAAAAGATGCAAAATCAAAGTGTGCATTTTGTTCTATCAACTGATGCAAAACCAAGGCTGAAATGGACTCCTCAGCTTCACCAAAGATTCATTGAGGCAATTAATCAGCTTGGAGGTTCAGAAAAAGCAACCCCAAAGAGCCTTATGAGAGTGATGGGGATTCCAGGACTTACTTTGTACCACTTGAAGAGCCATTTACAGAAATATAGACTTGGGAAAAGCCAACATCTAGAAACCTACTCTGACAACAACAAACAAGAAGATTATTACAGAGAAATCAAGAGCTGTAATAGTAGTGATGGTCATTGCAGCAAGGAGAACAGTGTTAGGCCCCAGAAACAAATTACTACTACTGATCAAAACATGGAGATTTCTCAGGCTCTCCAAATGCAAATGGAAGCACAGAGGAAACTTTATGAACAAATTGAGGTGCAGAAACATTTGCAACTAAAAATTGAAGCTCAGGGGAAGTATCTACAATCAGTGCTAAAGAAAGCACAAGAAGCACTTTCAGGATACAATTGTTCCACAATAGGCCTAGAACTCACACAAGCTGAACTTTCTCAGCTAGTTACAATAATCAACAATGCTTGTCCAAGTTCTCCAATCTCAGAACTGACAGAAAACAGAGGATTTTTGAGTCTGAGAAGTACTGAGGAGATGAAACAGGACAAAGGAACCATGTGTTCACTAGAAAGTTCCTTAACATCTTCTGAAAGCTCTGAGAGAAAAGAAGAAATTGAAGACATGATGATGAAAAACTCCAATAATAATGTTTCACTAGAACTGCCCTTTATGGAAATTCACACAAATAAAGCATCAAGTGGGAGAAAGAGAAGTGCATTATTAGGAACTGATGATTCTGAGGATAGCTGTGTTGATCAACCATATGGGAAAAGATCATGTGGCAACAATTTGAGGAAACCTGTGTTGTCAGAAATGCTTGACTTGAACAGTGAATATCATAGTGACATGGACTCAAGTACAAAAAAAACATTGGACTTAAATTGCAGTTCAAGCTTTTGGGAACCATGA 1038 0.3825 MEKMQNQSVHFVLSTDAKPRLKWTPQLHQRFIEAINQLGGSEKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQHLETYSDNNKQEDYYREIKSCNSSDGHCSKENSVRPQKQITTTDQNMEISQALQMQMEAQRKLYEQIEVQKHLQLKIEAQGKYLQSVLKKAQEALSGYNCSTIGLELTQAELSQLVTIINNACPSSPISELTENRGFLSLRSTEEMKQDKGTMCSLESSLTSSESSERKEEIEDMMMKNSNNNVSLELPFMEIHTNKASSGRKRSALLGTDDSEDSCVDQPYGKRSCGNNLRKPVLSEMLDLNSEYHSDMDSSTKKTLDLNCSSSFWEP* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1480 345 Pfam Myb-like DNA-binding domain 20 71 IPR001005 -
Aev05g1480 345 MobiDBLite consensus disorder prediction 224 243 - -
Aev05g1480 345 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 4 342 - -
Aev05g1480 345 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 342 IPR044848 GO:0003700
Aev05g1480 345 Coils Coil 126 146 - -
Aev05g1480 345 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 18 73 IPR006447 GO:0003677
Aev05g1480 345 Pfam MYB-CC type transfactor, LHEQLE motif 123 169 IPR025756 -
Aev05g1480 345 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Aev05g1480 345 Gene3D - 17 76 - -
Aev05g1480 345 MobiDBLite consensus disorder prediction 275 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1480 Aev-Chr5 11095411 11097312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1480 11 337 G2-like Transcription Factor Family AT1G69580 48.688 7.10e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev05g1480 Myb_DNA-binding 2.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1480 - - gmx:100787178 442.195