Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1477 ATGGCTTCTGAAACTGATTCATCTGAAATTTCCGCTCTCTTCGAAAGGCTAGTTAGAAACAGAGACATGTCACTCTTCCTACCTTTCATCTTTGGCTTCTCCGATTCTTCCCAATCACGTGAAAACAACGAAGAAGAAGAAGAAGATGCTGAATCAGGGACCACCGATGCTCCCAACCGTGAAAGGATCATCCTAGTGAACCCCTTCACCCAAGGCATGGTGGTGATCGACGGTGCGTCAAGCCTCGAAGCACTGTTCCGAGAAATCGGAAACAACACCAACAACAGCAGCAAAATTGGTCAACCTCCTGCTTCTAAGGAGTCGATAGAATCGATGCCACGTGTCGAGGTTCAAGAAGGTGAAGAATCTGGTGAGTGTGTGGTGTGTTTGGAGGATTTTGATGTCGGTGTTGTGGTGAAGGAGATGCCTTGTAAGCACCGATTTCATCCTAATTGCATTGAGAAGTGGTTAGGGATTCATGGGTCTTGCCCTGTTTGTAGGTACGTGATGCCTTCTGAGGAGAGAGATGAAGGGAAGAAGAGGGGTGAGGAAGGTGAAGGAGAGAGGAGAACTAGGGTTAGTGGTAGTGCTAGTGGTGAAGTTTGGGTTAGTTTTTCTATCAATAGGAATAGGAGAAGCCATGAACAGGAACAGGATCAGAATCAGAATCAAGCGCCTTCTGGTGCTGATGGTGATTCAAGTGATGATACATCAATTCCTAGAGGTGATGATGCTCAAGTATAG 744 0.4637 MASETDSSEISALFERLVRNRDMSLFLPFIFGFSDSSQSRENNEEEEEDAESGTTDAPNRERIILVNPFTQGMVVIDGASSLEALFREIGNNTNNSSKIGQPPASKESIESMPRVEVQEGEESGECVVCLEDFDVGVVVKEMPCKHRFHPNCIEKWLGIHGSCPVCRYVMPSEERDEGKKRGEEGEGERRTRVSGSASGEVWVSFSINRNRRSHEQEQDQNQNQAPSGADGDSSDDTSIPRGDDAQV* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1477 247 MobiDBLite consensus disorder prediction 219 234 - -
Aev05g1477 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 173 IPR013083 -
Aev05g1477 247 MobiDBLite consensus disorder prediction 172 247 - -
Aev05g1477 247 MobiDBLite consensus disorder prediction 172 193 - -
Aev05g1477 247 CDD RING-H2_PA-TM-RING 125 167 - -
Aev05g1477 247 ProSiteProfiles Zinc finger RING-type profile. 126 167 IPR001841 -
Aev05g1477 247 MobiDBLite consensus disorder prediction 34 60 - -
Aev05g1477 247 MobiDBLite consensus disorder prediction 91 110 - -
Aev05g1477 247 Pfam Ring finger domain 125 167 IPR001841 -
Aev05g1477 247 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 9 179 - -
Aev05g1477 247 PANTHER - 9 179 - -
Aev05g1477 247 SUPERFAMILY RING/U-box 117 171 - -
Aev05g1477 247 SMART ring_2 126 166 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1477 Aev-Chr5 11079800 11080543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1477 1 212 C3H Transcription Factor Family AT1G26800 47.442 2.67e-60 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1477 - - adu:107489464 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1477 05 11079800 11080543 Aev05g1477 05 11079800 11080543 ECH