Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1467 ATGAGCGATCACCTTGTGCTCTTCGTTGACCGTCTCCTGCGTCCCGCCGCCCCCTCCGACCCCGTCGAGCAGGCTGCGCAGCTCCCTGCCGACCCTTCGCTGCCTCCGCCGCCATCGGATGCGGTCGCTGGATCATCCAGATCGGCTCAGGCGGTGGATCGCGACTGCGACAGTGAGTCGGAGCGCGACGACGATGAGGAGGAGCCGCTGATCCAGATGGCAGAGTGCCGCATTTGTCAGGACGAGGACGACGTTTCCAATTTGGAAACTCCCTGCTCCTGCAATGGAAGTCTCAAGTATGCTCACAGAAAATGTGTCCAGCATTGGTGCAATGAGAAAGGAGACGTAACCTGTGAAATATGCCATCAGACGTATCAGCCTGGTTATACTGCGCCACCACCTCGCCCTCAGCCAGAAGAAACTACCATTGACATAGGTGGCTGGACAATATCTGGCACGCCTTTGGATTTGCGTGATCCTCGACTCTTGGCAATTGCAGAGGCAGAACGTCAATTTATGGATGCTGAATATGATGAGTATGCTGCTTCTAATGCCAGTGGAGCTGCATTTTGCCGCTCAGCAGCTCTAATTTTAATGGCCCTTTTACTCTTGCGGCATGCACTTTCAGTAACAGATGGTGGTGATTCTTCTGATGATGACCCATCCAACTTTTTCTCTCTTTTCTTGCTTCGCGCCGCTGGATTTCTTTTACCTTGCTATATCATGGCTTGGGCAATCAGTATTCTGCAACGCCGGCGACAACAGCAACAAAGACAAGAAGCTGCTGCACTGGCAGCAACACAATTTGCTTTTCTTCTACATACCGGGCAGCGGAGGGGGGGGTTACAGTTTGCCATAGCTCCAGGACCACACACAGTCCAGCAGGAACAAGTGTAG 897 0.5318 MSDHLVLFVDRLLRPAAPSDPVEQAAQLPADPSLPPPPSDAVAGSSRSAQAVDRDCDSESERDDDEEEPLIQMAECRICQDEDDVSNLETPCSCNGSLKYAHRKCVQHWCNEKGDVTCEICHQTYQPGYTAPPPRPQPEETTIDIGGWTISGTPLDLRDPRLLAIAEAERQFMDAEYDEYAASNASGAAFCRSAALILMALLLLRHALSVTDGGDSSDDDPSNFFSLFLLRAAGFLLPCYIMAWAISILQRRRQQQQRQEAAALAATQFAFLLHTGQRRGGLQFAIAPGPHTVQQEQV* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1467 298 CDD RING_CH-C4HC3_MARCH 76 122 - -
Aev05g1467 298 MobiDBLite consensus disorder prediction 16 69 - -
Aev05g1467 298 Pfam RING-variant domain 76 121 IPR011016 GO:0008270
Aev05g1467 298 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED 1 264 - -
Aev05g1467 298 SUPERFAMILY RING/U-box 74 126 - -
Aev05g1467 298 SMART ringv_2 75 122 IPR011016 GO:0008270
Aev05g1467 298 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 49 131 IPR013083 -
Aev05g1467 298 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 264 IPR033275 -
Aev05g1467 298 ProSiteProfiles Zinc finger RING-CH-type profile. 68 128 IPR011016 GO:0008270
Aev05g1467 298 Pfam Protein of unknown function (DUF3675) 127 246 IPR022143 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1467 Aev-Chr5 10977337 10979873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1467 58 163 C3H Transcription Factor Family AT5G05830 30.357 2.41e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1467 - - gmx:100779674 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1467 05 10977337 10979873 Aev05g1467 05 10977337 10979873 ECH