Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1465 ATGGACTTAACACAAACCTCAAATACAAACACACAAACACAAACCCCACCACCACCGCCACCAACAACAACCCAATTAGTCTCCTCCTCCACCACCACCACCAAGTCCACATCTTTTACCAACGGCTCCCTAAACCGCCACAAACCCATCACCACTGCGCCGCCGCAACCACCACCGTCCTCCATGGTGGTTTTCTCTTACAAGGAGTGCCTCAAGAACCATGCAGCCACCATAGGTGGCCACGCGCTCGACGGCTGCGGCGAGTTCATGCCTTCCTCATCCTCAAACCCCTCCGAGCCACGGTCACTCACGTGCGCCGCATGTGGCTGCCACCGTAACTTCCACCGCCGTGACAACCACCATACCCACCAAGATCATCATCAATTTCACCACCACCAAACCCCAAACTTCCTCAGCTTCTACCACTCACCACCACAACCACCATCTTCACTGGGCCCACACCGCGGGCTCAGCATCAGCACAAGCCCGAGCCCGAGCCCGAGCCCAAGCCCATCTCCGAGCCCCATTTCAAGCCCATCACCGCCGCCAATTTCGCACCACTTCCCACCTTATAGCAACAATAATAATTCCTCTTCAGCAGCGCCGAACATGCTATTAGCACTCGGAAATAGTGGTGCATGTAATAATTATTCATCAGATCATCAGAACAATCAAAACAGGGGTTTGAACTCTGTGACGAAAACAGAGAACAAGAATGGTCAGAATCAGAAGAAGAGGTATAGGACAAAGTTCAGCCAGGAGCAGAAGGAGAAGATGCTGAGATTCTCAGAGAAGCTGGGTTGGAGAATGCAGAAAGGGGATGAATCTCTGGTTCACGATTTCTGCAATCAAGTTGGGGTTTCAAGAGGGGTTTTCAAGGTTTGGATGCACAACAACAAGAACAATTTCAGGAAGAGATCCTTGGAAACAGATACACCCAATAATAATAATCAGAAGAATGGCAATGGTATTCACGACAATGACATTCACAGAGATTAA 999 0.5015 MDLTQTSNTNTQTQTPPPPPPTTTQLVSSSTTTTKSTSFTNGSLNRHKPITTAPPQPPPSSMVVFSYKECLKNHAATIGGHALDGCGEFMPSSSSNPSEPRSLTCAACGCHRNFHRRDNHHTHQDHHQFHHHQTPNFLSFYHSPPQPPSSLGPHRGLSISTSPSPSPSPSPSPSPISSPSPPPISHHFPPYSNNNNSSSAAPNMLLALGNSGACNNYSSDHQNNQNRGLNSVTKTENKNGQNQKKRYRTKFSQEQKEKMLRFSEKLGWRMQKGDESLVHDFCNQVGVSRGVFKVWMHNNKNNFRKRSLETDTPNNNNQKNGNGIHDNDIHRD* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1465 332 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 244 301 IPR006455 -
Aev05g1465 332 MobiDBLite consensus disorder prediction 216 246 - -
Aev05g1465 332 SUPERFAMILY Homeodomain-like 237 305 IPR009057 -
Aev05g1465 332 MobiDBLite consensus disorder prediction 121 197 - -
Aev05g1465 332 Gene3D - 230 304 - -
Aev05g1465 332 MobiDBLite consensus disorder prediction 164 188 - -
Aev05g1465 332 MobiDBLite consensus disorder prediction 216 238 - -
Aev05g1465 332 MobiDBLite consensus disorder prediction 1 60 - -
Aev05g1465 332 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 37 307 - -
Aev05g1465 332 MobiDBLite consensus disorder prediction 308 323 - -
Aev05g1465 332 ProSiteProfiles Zinc finger C2H2 type domain profile. 103 135 IPR013087 -
Aev05g1465 332 ProSitePatterns Zinc finger C2H2 type domain signature. 105 127 IPR013087 -
Aev05g1465 332 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 67 118 IPR006456 -
Aev05g1465 332 MobiDBLite consensus disorder prediction 25 50 - -
Aev05g1465 332 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 9 37 307 - -
Aev05g1465 332 MobiDBLite consensus disorder prediction 304 332 - -
Aev05g1465 332 Pfam ZF-HD protein dimerisation region 66 119 IPR006456 -
Aev05g1465 332 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 67 118 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1465 Aev-Chr5 10953133 10954131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1465 63 329 ZF-HD Transcription Factor Family AT2G02540 38.321 2.56e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev05g1465 ZF-HD_dimer 1.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1465 - - ahf:112803563 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1465 05 10953133 10954131 Aev05g1465 05 10953133 10954131 ECH
Aev05g1465 05 10953133 10954131 Aev06g3774 06 37820148 37821134 PCT