Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1439 ATGGAATTGGAAGCTGATCATCATCATCATCAAAACGGTATCCGAAGCAGACCCAATTTTCCTCTTCAGCTCTTAGAGAAAAAAGACGATGACGACTCCCCGCCGGAGCAACCGTGCTCCACCGCCGCCGCCGACAACAACAACAGCCTCACTCTGACGGAACAGCAGCAGCAGCAGCTGAGCAAGAAGCCGCCGCCGAAGCGGACGTCCACAAAGGACAGGCACACAAAGGTCGACGGCCGTGGCCGCCGGATCCGGATGCCGGCAGCCTGCGCCGCCCGGGTGTTCCAGTTGACGAGGGAATTGGGGCACAAGTCCGATGGCGAGACGATCGAGTGGCTCCTCCAGCAGGCGGAGCCCGCCGTGATCGCCGCCACCGGCACGGGCACCATCCCCGCCAACTTCACCTCCTTAAACATCTCGCTCCGGAGCTCCGGCTCCACCGTGTCGGCGCCGTCTCACTACTTCCGTGGAAGCTACTTCAATCCGAGCACCTTCTCCTCCCCCGCAGGCGGCGGCCGGAGCATCGGCATGAATATGCATATGAACATGAACATGAATATGAACTTGATGATGGAAGATTCTAGAAGGTTATTGTTCCCAGGCTCCTCGGAGAATAATAATAATAATTGTTCTAATTCTATGGTCTTGAATTTCAACCCTAGCATGAATGCAGCTCTACAAGCAAAGCAAGAGCTCCGGGAAGACGGCGGCGGAGGCGGCGGCGGTGGTGGTGGTGGCGGCGGAGGAAGCCTTGAGTTGGTGGATTGTGATGGAAGCTTAGGGAGGAAGAGAAGAGTGGAGCAAGAAGTTTCACATGTTGGAAGCTACTTGTTACAATCTAGTACTTCAGGGTCGCTTCCGGCGAGCCACGCCTCCAATCCGGCGACGTTTTGGATGGTGGCGGGTCACGGCCACCAAGGCGTCAACGGTGGCGGCGGCAGCAACGGTGGCGGTGGTGGTGATCCGATTTGGGCAATTCCCTCTTTGGGGAATAGTGGTGGAGTGTATAGAGGGGCTATGCCTAGTGGTGTTGGTGGGATTCATTTCATGAATTTTGGTTCTCCAATGTCTCTTATGCCAGCTGGACAATTAGGCCCCGGGATGGTCGGCAGCGGTGGCGGCGGCGGCGCGATGCTCGGTGAAAGCAATTTAGGTATGCTTGCTGCCCTTAATGCCTATAGGCAGATTCCGGCGGCCAACGGCGGCGTTTCGGATTCTCCGGGGAGTACCGGACATCAACACCATGGAGGTGATGATGGCCATGAAACAACCAGCCAACAACATTCCTAA 1293 0.5669 MELEADHHHHQNGIRSRPNFPLQLLEKKDDDDSPPEQPCSTAAADNNNSLTLTEQQQQQLSKKPPPKRTSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSHYFRGSYFNPSTFSSPAGGGRSIGMNMHMNMNMNMNLMMEDSRRLLFPGSSENNNNNCSNSMVLNFNPSMNAALQAKQELREDGGGGGGGGGGGGGGSLELVDCDGSLGRKRRVEQEVSHVGSYLLQSSTSGSLPASHASNPATFWMVAGHGHQGVNGGGGSNGGGGGDPIWAIPSLGNSGGVYRGAMPSGVGGIHFMNFGSPMSLMPAGQLGPGMVGSGGGGGAMLGESNLGMLAALNAYRQIPAANGGVSDSPGSTGHQHHGGDDGHETTSQQHS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1439 430 ProSiteProfiles TCP domain profile. 71 125 IPR017887 -
Aev05g1439 430 MobiDBLite consensus disorder prediction 39 65 - -
Aev05g1439 430 Pfam TCP family transcription factor 69 187 IPR017887 -
Aev05g1439 430 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 11 428 - -
Aev05g1439 430 MobiDBLite consensus disorder prediction 399 430 - -
Aev05g1439 430 MobiDBLite consensus disorder prediction 1 86 - -
Aev05g1439 430 MobiDBLite consensus disorder prediction 413 430 - -
Aev05g1439 430 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 11 428 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1439 Aev-Chr5 10731604 10732896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1439 18 364 TCP Transcription Factor Family AT3G47620 40.534 1.12e-58 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev05g1439 TCP 9.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1439 - - adu:107489244 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1439 05 10731604 10732896 Aev05g1439 05 10731604 10732896 ECH
Aev05g1439 05 10731604 10732896 Aev01g2113 01 25579943 25581244 PCT