Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1430 ATGGCTTTCTTCCAAGCAAATTTCATGCTACAAACCCCTCATCACCACCATGATGATCATCACCACCACCAACATCATCCACCTTCAATCAACTCAATTCTACCCTCATGTGGTGCACCACAAGATTACCATGGGGGAGGATCTTTTCTAGGGAAGAGATCTATGTCATTTTCAGGGATTGATCTTGGAGGAGGAGAAGATAATAATGCAAATAACAATAATGGTAATAATAATATGAATGGAGAGGATGATTTATCAGATGATGGGTCACAGCTACTAGGGGAGAAGAAGAGGAGGCTGAACATGGAGCAAGTGAAGACACTTGAGAAGAGCTTTGAGCTCGGAAACAAGCTTGAGCCTGAGAGGAAAATGCAGCTTGCAAGGGCTCTTGGATTGCAACCAAGGCAAATTGCTATATGGTTCCAGAATCGAAGGGCTAGGTGGAAGACTAAGCAGTTGGAGAAAGATTATGATCTTCTTAAGAAACAGTTTGATGCTGTTAAGTCAGATAATGATTCACTTCAAGCTCAGAACCAGAAACTTCAGGCTGAGATATTGGCACTGAAAAGTAGAGAGCCAGCAACAGAGTCCATAAACCTGAACAAAGAAACAGAAGGGTCATGCAGCAATAGAAGTGAGAACAGCTCAGAGATCAAGTTGGAAATATCAAGGACACCACCAGCTATTGACAGTCCTTTATCCACACAACATCAAATTACCAGCATACCCTTCTTTCAATCATCAATATCCACTACTTCTAATTCTTCTGCTACTCCTAGGCCTGTTACTACAGGTGGAGGAGGAATTTCAGTGCCTCATCATCATCATCTTTTTCATCAAAGTAATTCTAATAATTCATCAAGACCAGATCATCATCACATGATCCAGAGCCACCAGAAGATGGATCACATGGCAAAAGAAGAGAGTTTGAGCAACATGTTTGTTGCCATGGAGGATCAATCTGGGTTCTGGCCTTGGTTGGAGCAGCAACATTTCAATTGA 1002 0.4192 MAFFQANFMLQTPHHHHDDHHHHQHHPPSINSILPSCGAPQDYHGGGSFLGKRSMSFSGIDLGGGEDNNANNNNGNNNMNGEDDLSDDGSQLLGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKKQFDAVKSDNDSLQAQNQKLQAEILALKSREPATESINLNKETEGSCSNRSENSSEIKLEISRTPPAIDSPLSTQHQITSIPFFQSSISTTSNSSATPRPVTTGGGGISVPHHHHLFHQSNSNNSSRPDHHHMIQSHQKMDHMAKEESLSNMFVAMEDQSGFWPWLEQQHFN* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1430 333 Coils Coil 143 191 - -
Aev05g1430 333 CDD homeodomain 96 152 IPR001356 GO:0003677
Aev05g1430 333 Gene3D - 90 157 - -
Aev05g1430 333 Pfam Homeodomain 96 149 IPR001356 GO:0003677
Aev05g1430 333 SMART HOX_1 94 155 IPR001356 GO:0003677
Aev05g1430 333 SUPERFAMILY Homeodomain-like 94 153 IPR009057 -
Aev05g1430 333 MobiDBLite consensus disorder prediction 65 85 - -
Aev05g1430 333 PRINTS Lambda-repressor HTH signature 131 147 IPR000047 GO:0003677
Aev05g1430 333 PRINTS Lambda-repressor HTH signature 122 131 IPR000047 GO:0003677
Aev05g1430 333 ProSiteProfiles 'Homeobox' domain profile. 95 151 IPR001356 GO:0003677
Aev05g1430 333 MobiDBLite consensus disorder prediction 196 217 - -
Aev05g1430 333 Pfam Homeobox associated leucine zipper 151 191 IPR003106 GO:0006355|GO:0043565
Aev05g1430 333 ProSitePatterns 'Homeobox' domain signature. 126 149 IPR017970 GO:0000981|GO:0006355
Aev05g1430 333 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 333 IPR045224 GO:0003700
Aev05g1430 333 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 1 333 - -
Aev05g1430 333 MobiDBLite consensus disorder prediction 60 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1430 Aev-Chr5 10538336 10540301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1430 1 333 Homeobox Transcription Factor Family AT1G69780 57.313 1.92e-117 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev05g1430 Homeodomain 1.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1430 K09338 - rcu:8286990 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1430 05 10538336 10540301 Aev05g1430 05 10538336 10540301 ECH
Aev05g1430 05 10538336 10540301 Aev03g0469 03 3429345 3430507 PCT
Aev05g1430 05 10538336 10540301 Aev06g3785 06 37924019 37925461 PCT