Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1425 ATGCAAGATATGAAGAAGAAGCAGAAGCAGGTGGTGTTGGTCAATGAAGAATCTAAGAAGAAGGAGCGTCACATTGTGACGTGGACTCAACAGGAGGATGATATATTGAGGGAGCAGATTGGCATCCATGGAACTGAAAATTGGGCAATTATTGCTTCTAAGTTCAAGGATAAAACTACAAGACAGTGCAGAAGAAGATGGTACACTTACCTGAATTCTGATTTCAAGAAAGGAGGATGGTCCCCAGAAGAAGACATGCTCTTATGCGAGGCTCAGAAAATATTCGGTAATAGGTGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAATGCTGTGAAAAACCGGTTCTCCACTTTGTGCAAAAAGAGAGCAAAATATGAAGCCTTAGCAAAAGAGAACAACACTACTTACATTAATTCAAATAACAAGAGGATCATTTTCCATCATGAGTATAATACAGATGCAGCATCAGAATCTAGTGTAGCTATTAAGAAGATGAGGAGGTCTCATATTCCCGATGATGCCGAAAGGATCAGCTTTGGCGACAGATCACATAAGCAAAATGTAACTCCGGTAATTCAGCAGACTAGATCACCGTTTGCCGTATTAGCTGAGAATGCTCATGATGTCAACAACTTGGCAGACCAGCATCATGTCTGCAGCGCAAAGTTCGGTGGTTACGTCCAAAACAACAAGATACAAGGAACATTTCTTAAAAAGGACGATCCAAAGATAAGCGCATTGATGCAACAAGCAGAGTTACTAAGTTCATTAGCCCTTAAAGTTGATTCAGAGAATATGGACCAAAGTCTAGAAAATGCCTGGAAGATTCTTCAAGAGTTTCTGACTCGAACCAAAGAATCTGATGTTCCAAGATATAAGATTCCAGATCTACACCTTGTGGATCTTAGAGACCTCTTGGAGGACTTAAAGAGCAGTAGCGAAGAGATCCAGCCGTGTTGGAGGCAAATGGAACTATATGAAGACTCTCCGGGTAGTTCTGAATACAGCACAGGATCAACTATCTTGCCCCATTCAGGTGGTGATCATTTGGAACACTCACTGCATCATGATATTGGAACTGAACTGGATTGTATACAAATTGGAGATCAAAATGGAGTTGTAGGATGTGAGCAAGGGGTTCTCTCTACTACAACTTTGGATCAAGATATATTCCAATCTTGTGAGGAACAGATGAACAATGATGGCATTGTTTCTGCCTCGTCAATGACAGAGTTCGGTTCCCCTCTTCAAGTTACCCCGCTCTTCAGATCCTTGGCTGCCGGAATTCCAAGCCCACAATTTTCAGAGAGTGAGAGGAACTTTCTAATGAAAACGCTTGGAATGGAATCTCCATCCCTCAACACGAGCACCAACCCCTCGCAACCGCCGCTCTGCAAAAGGTCCCTGCTGCATAGTCTATAA 1431 0.4249 MQDMKKKQKQVVLVNEESKKKERHIVTWTQQEDDILREQIGIHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKYEALAKENNTTYINSNNKRIIFHHEYNTDAASESSVAIKKMRRSHIPDDAERISFGDRSHKQNVTPVIQQTRSPFAVLAENAHDVNNLADQHHVCSAKFGGYVQNNKIQGTFLKKDDPKISALMQQAELLSSLALKVDSENMDQSLENAWKILQEFLTRTKESDVPRYKIPDLHLVDLRDLLEDLKSSSEEIQPCWRQMELYEDSPGSSEYSTGSTILPHSGGDHLEHSLHHDIGTELDCIQIGDQNGVVGCEQGVLSTTTLDQDIFQSCEEQMNNDGIVSASSMTEFGSPLQVTPLFRSLAAGIPSPQFSESERNFLMKTLGMESPSLNTSTNPSQPPLCKRSLLHSL* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1425 476 PANTHER TRANSCRIPTION FACTOR MYB88 4 473 - -
Aev05g1425 476 SMART sant 24 73 IPR001005 -
Aev05g1425 476 SMART sant 76 124 IPR001005 -
Aev05g1425 476 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 71 IPR017930 -
Aev05g1425 476 CDD SANT 80 121 IPR001005 -
Aev05g1425 476 Gene3D - 14 76 - -
Aev05g1425 476 SUPERFAMILY Homeodomain-like 24 118 IPR009057 -
Aev05g1425 476 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
Aev05g1425 476 Pfam Myb-like DNA-binding domain 28 88 - -
Aev05g1425 476 ProSiteProfiles Myb-like domain profile. 28 71 IPR001005 -
Aev05g1425 476 CDD SANT 27 71 IPR001005 -
Aev05g1425 476 PANTHER MYB PROTEIN-RELATED 4 473 - -
Aev05g1425 476 Gene3D - 79 148 - -
Aev05g1425 476 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1425 Aev-Chr5 10476094 10482106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1425 66 476 MYB Transcription Factor Family AT1G14350 52.381 3.87e-137 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g1425 Myb_DNA-bind_6 3.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1425 K09422 - gmx:100807667 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0449 03 3290180 3293855 Aev05g1425 05 10476094 10482106 PCT