Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1416 ATGATGGAAGATCCTATTCTCATCTTGGAGTCTGACCGAGAAGAAGAGATTGGTAGCATTAAGGATCAAAATCTTGGATCAATGAAGGGGGAAATAATGGGAGATAATGCTAGAGAAGAAAAAGGGAATTTGAAGTTCTTATTGGCAAGCCTTGTGAAGGATTACCAATCACTACAACAAGATCATAAACCAATTACTACAAAAGTTATTAAAGGTACATCAATTACTCTTGAAGAATGTGATGATGATGATGAAGTACTTGTGTCTCTTTCTCTTTCTCTTGGGGTCTCATCATTATCCAAAGACAACCCTAATAACATCATCAATAGCAATATTAATACTAATAGAATTGAAGAAAAGAGAGAATTAGATGATGATGATGAAGGGCTTGCACTAGGGTTAGATATAAGATTTGACCCATCATCATCATCACCTCCTCATCAAGATGAAGTAGCTACAAATAATAATCATAGCCAAGAAAGTAGCCTTGTTGAGGAAGAAGGGAAGGAAGAGGAACCAAGTGAGATGTGGCCACCAAGTAAAGTTCTCAAGACAATCAAAGCTGTGGACAAAAGTGGAGCTTCTCATCAACAACAACAAACTCAGCTCAAGAAAACTAGGGTTTCTATTAGAGCCAGATGTGATACACAAACGATGAATGATGGGTGTCAATGGAGAAAATATGGGCAAAAAATAGCAAAAGGAAATCCATGCCCCCGAGCTTACTATCGATGCACTGTATCTCCATCTTGTCCTGTGAGAAAACAGGTGCAAAGATGTGCTGAGGATATGTCCATATTAATTACCACATATGAAGGAACACACAACCACCCACTTCCTCTTTCAGCCACAGCTATGGCCTCAACCACTTGTGCAGCTGCTTCAATGCTTCAATCTCCCTCACTCCTCAGTTCACAACAACCACTGCCCAATTCATCTGATATCATGGCATCCATTTTCACTTCCACAATTCCTCCTCAATACAATAACAACAATTCTTCAACATGCCAAATTTCAAGTCCAAACCACCAATTCCAATTCTCAAACTCTTCCTTCTATTCAACCTCAAATCACAATTCTCACCCCACAATCACTCTTGACCTCACTACACCACCACCAAGTACTTCCTCTGCCTTTTCTTACACACCAAAGTATTCATCAACAAACCTCAATTTCTCATCATCATCAAATTTCTCTCCTCTGCAATCTAGCCTGCAATTACCACCACATTATTCATCACCCTTGAGCAGTTATATAACGCAAAACAGATCAAACCAAGGAGGTGTTTATGTGATAAACAGTGGTTCATCACAACAATTTCAGGGGAATCACAACAATCAGAACAACATTATTTCTCAACATACCATTGCTGCTGCAACAAAGGCAATCACAACAAACCCAAAATTTCAATCAGCATTAGCCTCTGCTCTCACAACATACGTTGGAAATAATGGAGGAGTTGTTATTGGTGATAGGCTAAGTAGTAGTATTGGTGGATCATCATCATCTAGGTACTTATTCAACATGTCTTCTTCTTCTTCTTCTCCTAATAATAATGTTCAACAAGAAAATGGATACTCATCATCAATCATGATTCCATTAGCATTGCCACTGTCTAAAGGTTCCCCTGCAATGTCATCTAATAATAGAAGTAACCAGTTCTTGGAGCAATGGAAGTGA 1680 0.3875 MMEDPILILESDREEEIGSIKDQNLGSMKGEIMGDNAREEKGNLKFLLASLVKDYQSLQQDHKPITTKVIKGTSITLEECDDDDEVLVSLSLSLGVSSLSKDNPNNIINSNINTNRIEEKRELDDDDEGLALGLDIRFDPSSSSPPHQDEVATNNNHSQESSLVEEEGKEEEPSEMWPPSKVLKTIKAVDKSGASHQQQQTQLKKTRVSIRARCDTQTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVSPSCPVRKQVQRCAEDMSILITTYEGTHNHPLPLSATAMASTTCAAASMLQSPSLLSSQQPLPNSSDIMASIFTSTIPPQYNNNNSSTCQISSPNHQFQFSNSSFYSTSNHNSHPTITLDLTTPPPSTSSAFSYTPKYSSTNLNFSSSSNFSPLQSSLQLPPHYSSPLSSYITQNRSNQGGVYVINSGSSQQFQGNHNNQNNIISQHTIAAATKAITTNPKFQSALASALTTYVGNNGGVVIGDRLSSSIGGSSSSRYLFNMSSSSSSPNNNVQQENGYSSSIMIPLALPLSKGSPAMSSNNRSNQFLEQWK* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1416 559 MobiDBLite consensus disorder prediction 141 161 - -
Aev05g1416 559 ProSiteProfiles WRKY domain profile. 214 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev05g1416 559 MobiDBLite consensus disorder prediction 135 180 - -
Aev05g1416 559 Gene3D WRKY domain 204 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev05g1416 559 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 17 545 IPR044810 GO:0003700
Aev05g1416 559 SMART WRKY_cls 219 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev05g1416 559 Pfam WRKY DNA -binding domain 220 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev05g1416 559 PANTHER WRKY TRANSCRIPTION FACTOR 72B 17 545 - -
Aev05g1416 559 SUPERFAMILY WRKY DNA-binding domain 212 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1416 Aev-Chr5 10368535 10373544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1416 175 532 WRKY Transcription Factor Family AT5G15130 39.899 1.91e-64 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev05g1416 WRKY 3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1416 - - lang:109339108 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1416 05 10368535 10373544 Aev01g2100 01 25500135 25505506 PCT
Aev01g2796 01 30424685 30426395 Aev05g1416 05 10368535 10373544 PCT