Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1407 ATGGGTTTGGATGGTGAGAATGTTAAGGTTGTGGAGGAGTCTTGGGATGTGTGCAAATCAAAAGGGAAGAAGAAGAATAAGAAGCAGAAAGAGGGTGGTGAGGTAGTTGTGGAGGAAGAAGATGAGGTAGATACTGGGTGTTGGGTTAGGCTCAAGTTCATTGGAGGCTGCATTTCTTCAAGATCCAAGGTTGATACCTCAGTCAGTGGCACCAGCACTCATTATGCTGAAAGTAAATCAACTATTGATACTAGTAGAGACCAACCAACAGCTCCAGTAGTGTCCTCTACAACTACTAGTAATGCGGAAAGCAGTTCATCCACTTCTAAACTTGAAGAGGAGCTTAAAGTTGCTTCGAGGCTGCGAAAGTTCTCTTTCAATGATCTTAAGTTGGCAACAAGAAATTTTCGGCCTGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTATTCAAGGGGTGGATCGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACCGTTGCTGTAAAAACCCTCAACCATGATGGGCTCCAGGGCCATAAAGAATGGCTGGCTGAAGTAAATTTTCTTGGTGATTTGGTTCATCCAAACCTTGTTAAGCTTATAGGGTACTGCATTGAAGATGATCAAAGGTTGCTAGTTTATGAATTCATGCCTAGGGGAAGCCTAGAAAACCACTTATTTAGGAGATCCCTGCCTCTTCCATGGTCCATTAGGATGAAAATTGCGCTAGGAGCAGCAAACGGTCTTGCTTTTCTTCATGAAGAAGCCGAACGACCAGTTATATATAGGGATTTTAAAACTTCGAATATATTACTAGATGCTGACTACAATGCCAAGCTCTCGGACTTTGGACTTGCCAAAGATGGTCCAGAAGGTGATAAAACCCATGTGTCTACTCGAGTGATGGGAACCTACGGTTATGCAGCACCGGAATATGTCATGACAGGTCATCTTACATCAAGAAGTGACGTGTACAGTTTTGGAGTGGTACTACTTGAGATGTTGACCGGCAGAAGATCCATGGACAAACACCGACCCAACGGCGAACATAACCTCGTGGAATGGGCTCGACCGCATCTTGGAGAGAGGAGAAAGTTCTACAAGTTGATAGATCCTCGCCTGGAAGGTCACTTCTCCATAAAAGGAGCTCAGAAAGCTGCCCAACTGGCCGCGCACTGCCTCAGTAGAGATCCGAAAGCCAGACCCTTGATGAGCGAAGTTGTAGAAGCTCTAAAGCCTCTCCTAAACCTCAAGGACATGGCAAGCTCTTCATATTACTTCCAGACGATGCAGGCTGACAGGTTTAGCCCTAGCCCGAATACTCGAAACGGGCGGACGCAAGGAGCATTGCTCACCCGGAATGGTCAGCAGCATAGGAGCCTTTCAATACCTCATGGTACTCATGCATCTCCATATCACCATCAGTTTCCCCAACCATCACCAAAACCCAATGGCAAAGCTTAG 1479 0.4604 MGLDGENVKVVEESWDVCKSKGKKKNKKQKEGGEVVVEEEDEVDTGCWVRLKFIGGCISSRSKVDTSVSGTSTHYAESKSTIDTSRDQPTAPVVSSTTTSNAESSSSTSKLEEELKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAANGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGERRKFYKLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLLNLKDMASSSYYFQTMQADRFSPSPNTRNGRTQGALLTRNGQQHRSLSIPHGTHASPYHHQFPQPSPKPNGKA* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1407 492 MobiDBLite consensus disorder prediction 63 108 - -
Aev05g1407 492 ProSitePatterns Protein kinases ATP-binding region signature. 142 174 IPR017441 GO:0005524
Aev05g1407 492 MobiDBLite consensus disorder prediction 458 492 - -
Aev05g1407 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Aev05g1407 492 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 66 482 - -
Aev05g1407 492 MobiDBLite consensus disorder prediction 63 109 - -
Aev05g1407 492 Gene3D Phosphorylase Kinase; domain 1 95 221 - -
Aev05g1407 492 Gene3D Transferase(Phosphotransferase) domain 1 222 437 - -
Aev05g1407 492 Pfam Protein tyrosine and serine/threonine kinase 140 416 IPR001245 GO:0004672|GO:0006468
Aev05g1407 492 PANTHER OS01G0588500 PROTEIN-RELATED 66 482 - -
Aev05g1407 492 SUPERFAMILY Protein kinase-like (PK-like) 122 442 IPR011009 -
Aev05g1407 492 ProSiteProfiles Protein kinase domain profile. 136 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g1407 492 CDD STKc_IRAK 142 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1407 Aev-Chr5 10277891 10281259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1407 83 416 Glycoside Hydrolase AT3G07070 53.550 5.71e-117 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aev05g1407 PK_Tyr_Ser-Thr 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1407 - - gmx:100787127 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1407 05 10277891 10281259 Aev05g1407 05 10277891 10281259 ECH
Aev05g1407 05 10277891 10281259 Aev06g3805 06 38043406 38046221 PCT