Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev05g1407 | ATGGGTTTGGATGGTGAGAATGTTAAGGTTGTGGAGGAGTCTTGGGATGTGTGCAAATCAAAAGGGAAGAAGAAGAATAAGAAGCAGAAAGAGGGTGGTGAGGTAGTTGTGGAGGAAGAAGATGAGGTAGATACTGGGTGTTGGGTTAGGCTCAAGTTCATTGGAGGCTGCATTTCTTCAAGATCCAAGGTTGATACCTCAGTCAGTGGCACCAGCACTCATTATGCTGAAAGTAAATCAACTATTGATACTAGTAGAGACCAACCAACAGCTCCAGTAGTGTCCTCTACAACTACTAGTAATGCGGAAAGCAGTTCATCCACTTCTAAACTTGAAGAGGAGCTTAAAGTTGCTTCGAGGCTGCGAAAGTTCTCTTTCAATGATCTTAAGTTGGCAACAAGAAATTTTCGGCCTGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTATTCAAGGGGTGGATCGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACCGTTGCTGTAAAAACCCTCAACCATGATGGGCTCCAGGGCCATAAAGAATGGCTGGCTGAAGTAAATTTTCTTGGTGATTTGGTTCATCCAAACCTTGTTAAGCTTATAGGGTACTGCATTGAAGATGATCAAAGGTTGCTAGTTTATGAATTCATGCCTAGGGGAAGCCTAGAAAACCACTTATTTAGGAGATCCCTGCCTCTTCCATGGTCCATTAGGATGAAAATTGCGCTAGGAGCAGCAAACGGTCTTGCTTTTCTTCATGAAGAAGCCGAACGACCAGTTATATATAGGGATTTTAAAACTTCGAATATATTACTAGATGCTGACTACAATGCCAAGCTCTCGGACTTTGGACTTGCCAAAGATGGTCCAGAAGGTGATAAAACCCATGTGTCTACTCGAGTGATGGGAACCTACGGTTATGCAGCACCGGAATATGTCATGACAGGTCATCTTACATCAAGAAGTGACGTGTACAGTTTTGGAGTGGTACTACTTGAGATGTTGACCGGCAGAAGATCCATGGACAAACACCGACCCAACGGCGAACATAACCTCGTGGAATGGGCTCGACCGCATCTTGGAGAGAGGAGAAAGTTCTACAAGTTGATAGATCCTCGCCTGGAAGGTCACTTCTCCATAAAAGGAGCTCAGAAAGCTGCCCAACTGGCCGCGCACTGCCTCAGTAGAGATCCGAAAGCCAGACCCTTGATGAGCGAAGTTGTAGAAGCTCTAAAGCCTCTCCTAAACCTCAAGGACATGGCAAGCTCTTCATATTACTTCCAGACGATGCAGGCTGACAGGTTTAGCCCTAGCCCGAATACTCGAAACGGGCGGACGCAAGGAGCATTGCTCACCCGGAATGGTCAGCAGCATAGGAGCCTTTCAATACCTCATGGTACTCATGCATCTCCATATCACCATCAGTTTCCCCAACCATCACCAAAACCCAATGGCAAAGCTTAG | 1479 | 0.4604 | MGLDGENVKVVEESWDVCKSKGKKKNKKQKEGGEVVVEEEDEVDTGCWVRLKFIGGCISSRSKVDTSVSGTSTHYAESKSTIDTSRDQPTAPVVSSTTTSNAESSSSTSKLEEELKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAANGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGERRKFYKLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLLNLKDMASSSYYFQTMQADRFSPSPNTRNGRTQGALLTRNGQQHRSLSIPHGTHASPYHHQFPQPSPKPNGKA* | 493 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev05g1407 | 492 | MobiDBLite | consensus disorder prediction | 63 | 108 | - | - | |
Aev05g1407 | 492 | ProSitePatterns | Protein kinases ATP-binding region signature. | 142 | 174 | IPR017441 | GO:0005524 | |
Aev05g1407 | 492 | MobiDBLite | consensus disorder prediction | 458 | 492 | - | - | |
Aev05g1407 | 492 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 265 | 277 | IPR008271 | GO:0004672|GO:0006468 | |
Aev05g1407 | 492 | PANTHER | KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED | 66 | 482 | - | - | |
Aev05g1407 | 492 | MobiDBLite | consensus disorder prediction | 63 | 109 | - | - | |
Aev05g1407 | 492 | Gene3D | Phosphorylase Kinase; domain 1 | 95 | 221 | - | - | |
Aev05g1407 | 492 | Gene3D | Transferase(Phosphotransferase) domain 1 | 222 | 437 | - | - | |
Aev05g1407 | 492 | Pfam | Protein tyrosine and serine/threonine kinase | 140 | 416 | IPR001245 | GO:0004672|GO:0006468 | |
Aev05g1407 | 492 | PANTHER | OS01G0588500 PROTEIN-RELATED | 66 | 482 | - | - | |
Aev05g1407 | 492 | SUPERFAMILY | Protein kinase-like (PK-like) | 122 | 442 | IPR011009 | - | |
Aev05g1407 | 492 | ProSiteProfiles | Protein kinase domain profile. | 136 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aev05g1407 | 492 | CDD | STKc_IRAK | 142 | 419 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev05g1407 | Aev-Chr5 | 10277891 | 10281259 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev05g1407 | 83 | 416 | Glycoside Hydrolase | AT3G07070 | 53.550 | 5.71e-117 | 348 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Aev05g1407 | PK_Tyr_Ser-Thr | 4.1e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev05g1407 | - | - | gmx:100787127 | 859.366 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev05g1407 | 05 | 10277891 | 10281259 | Aev05g1407 | 05 | 10277891 | 10281259 | ECH | |
Aev05g1407 | 05 | 10277891 | 10281259 | Aev06g3805 | 06 | 38043406 | 38046221 | PCT |