Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1405 ATGGAGTTGTTTCAACTACCCAAACAATCCACAGAATCGATTTCAAGTTCAGTAGTCCAATCCTCCTTCGACTCCATCTACTCCCGTTACGCACGCGAGGCGCTCGACGAATTGTCTGAGAGCTTCACCATCACCGACCCTTCAATCCCTGGCCACCCAATCGTCTTCGCCAGCATCGGCTTCCTCAAGATGACAGGGTACAACCGAGACGAGGTTGTTGGAAAAGGTGGTGCCATGTTTCAGGGTCCAGGAACTTCTAGAAGGTCGGTGATGGAGATTCGGGAGGCAGTTAGGGAAGAACGCAGCTGCCACGTCAGCCTGCTGAATTACCGCAAGGATGGGACACCGTTCTGGATGCTGTTTCATGTGAGCCCTGTTTTTGGAAGGGACGGTGGTGGGGTTGTTCATTTTGTGGCAGTTCAGGTGCCTTTGCAGGGGATACAGCGGCGTTCCGGTGGTTGTCGGAGAGGTAGTGGCGGTGGCGGTGGTGATTATGCGTTAGGGTGTTGCAGGAAGGAGGTGTGTTCGGATAATGTGTTGGAGATTGGTCGTGTGTCTTCCATGGATAACGGGTCAGAGCATGATGCTAGAGAATTGGAGAGTGATGAGCCTTGTGAGGCTAGTGATGATGAGAAGAGAAGCGCAATGACTGCCATGGACAATATTTTTTCTGTGCTAACCCACTATAGTGAGTCAACTGGCAGATCGGTGTGTAGAAAGCGATGCGGCATACTTGACGTGGGTCTTCTTAGCACCTCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCGCATTTACCTGACATGCCTATTGTATATGCCAGTGACGCCTTCTTGAAATTGACAGGGTATGCAAGAGATGAAGTGGTGGGGCGCAACTGTAGATTTTTAAGTGGGACGGATACTGATAGCTCAACTTTATGTCTGATAAGGGAAAGCATTAAAACTGAACAACCATGCACAGTACGTATTTTGAATTACAGGAAGGATAAAAGCTCATTTTGGAACCTTCTACACATCTCACCGGTTCGTGATGCTTCTGGCAAGGTGGCATACTTCGTTGGAGTTCAAATAGAAGAAGAGTATAAAAACGAGGATAGACAATGTTTGAGCCCTGAGATGAGGCAGCGTAGCGTGGTTGGTTCGGTCAAGGTTGCAGTTAGGGGTTTATCAATGAATGCTGGATCTTCCAACTCTAAGTCATAG 1224 0.4788 MELFQLPKQSTESISSSVVQSSFDSIYSRYAREALDELSESFTITDPSIPGHPIVFASIGFLKMTGYNRDEVVGKGGAMFQGPGTSRRSVMEIREAVREERSCHVSLLNYRKDGTPFWMLFHVSPVFGRDGGGVVHFVAVQVPLQGIQRRSGGCRRGSGGGGGDYALGCCRKEVCSDNVLEIGRVSSMDNGSEHDARELESDEPCEASDDEKRSAMTAMDNIFSVLTHYSESTGRSVCRKRCGILDVGLLSTSLIISLGRIKQSFVLTNPHLPDMPIVYASDAFLKLTGYARDEVVGRNCRFLSGTDTDSSTLCLIRESIKTEQPCTVRILNYRKDKSSFWNLLHISPVRDASGKVAYFVGVQIEEEYKNEDRQCLSPEMRQRSVVGSVKVAVRGLSMNAGSSNSKS* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1405 407 MobiDBLite consensus disorder prediction 188 211 - -
Aev05g1405 407 ProSiteProfiles PAS repeat profile. 27 75 IPR000014 -
Aev05g1405 407 TIGRFAM sensory_box: PAS domain S-box protein 277 363 IPR000014 -
Aev05g1405 407 TIGRFAM sensory_box: PAS domain S-box protein 54 134 IPR000014 -
Aev05g1405 407 SMART pac_2 327 367 IPR001610 -
Aev05g1405 407 SMART pac_2 104 147 IPR001610 -
Aev05g1405 407 ProSiteProfiles PAS repeat profile. 277 299 IPR000014 -
Aev05g1405 407 Gene3D PAS domain 264 406 - -
Aev05g1405 407 MobiDBLite consensus disorder prediction 187 211 - -
Aev05g1405 407 CDD PAS 54 141 IPR000014 -
Aev05g1405 407 Gene3D PAS domain 28 150 - -
Aev05g1405 407 SUPERFAMILY PYP-like sensor domain (PAS domain) 267 363 IPR035965 -
Aev05g1405 407 CDD PAS 273 362 IPR000014 -
Aev05g1405 407 ProSiteProfiles PAC domain profile. 324 378 IPR000700 -
Aev05g1405 407 SMART pas_2 29 98 IPR000014 -
Aev05g1405 407 SMART pas_2 252 325 IPR000014 -
Aev05g1405 407 PANTHER PROTEIN TWIN LOV 1 19 406 - -
Aev05g1405 407 SUPERFAMILY PYP-like sensor domain (PAS domain) 42 140 IPR035965 -
Aev05g1405 407 PANTHER PROTEIN TWIN LOV 1 19 406 - -
Aev05g1405 407 Pfam PAS domain 50 141 IPR000014 -
Aev05g1405 407 Pfam PAS domain 264 363 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1405 Aev-Chr5 10255325 10259243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1405 28 365 AGC Kinase Gene Family AT5G58140 32.979 2.57e-61 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1405 - - adu:107489171 625.935