Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1401 ATGCGTGTGGCTATGGCTGGTGGCAAGCTTTATGGGGGAGCTAACATGGCAGTTCTGCTGCAAAACGAGAGGCTACCTTGTTCCTCTGATGTTCTTGAGTCTCTCTGGCTTCACACCTCTGACCCTCCTTCTTTCCAAGGTTCAAAATCGGTGGTTGATTTTGAGAACGGAAACAGGGGAATTAGCAGCAACAACAACAGGGTGATAACAGAGCATCACAGAAGCTTCTTCCAAGGCCTTGAAAAAGAAGAGAATTGCTGCGATGACGATTACGATTCGTGCTTCAACCAAATGGGCAGTAATAGCAAGAAAAGGAGGCTCACAAGTGAACAAGTTCAGTTCCTTGAAAGGAACTTTGAAATCGAGAACAAGCTTGAACCAGAAAGGAAAGTTCAGCTTGCTAAAGAACTTGGGTTGCAGCCAAGGCAAGTAGCGATATGGTTCCAGAATCGAAGAGCAAGGTTTAAGACTAAGCAGCTTGAGAAAGAGTATGGTGCATTGAAATCTAGCTATGATAAACTCAAAGGTGACTATGAAAATCTTCAACAACAGAATGACAAGTTAAGAGAAGAGGTGAATTCTCTGAAGAACAAGTTGATTCCAAGAGATAATAATAATAATAAAGAGAAAGAGAAATCATCATCATGTGGTGCAGATGCTACTACTACTATTGCAGTGAATTCACCTCAGAAAGATGAGGCTGAGGAGCCTCTTATGGACTTAATCTCAATTTCAAATACAAATTCTGATGATGATGGATCCAACAAGTTACCTCTCCCTATTATGGTAACATGTTGCAAGCAACAGCACCAAGAAGATGCCAATTCTGCAAAAAGTGATGTTCTTGATTCAGACAGCCCTCAATATTGCAATGATATTGTGAACAACAACATTAACAAAACCAAAAACAACATCCATCATCATTCTTCTGCCTCCTCATTTGTGGAGCCAGCTGATGATTCCTCACAGGATGATGAAGATGATAATCTTAGTACTGAGAATCTTTTGACCCTTCCTTGCTTGCCTAAGGTTGAAGAGGAAGAAGATGCTTGCTATCCTGACAAGTACACTACTTGTGGATTTGGCTTCCCTGTTGAAGATCAAGCCTTTTGTTTCTGGCCTTATTGA 1128 0.4122 MRVAMAGGKLYGGANMAVLLQNERLPCSSDVLESLWLHTSDPPSFQGSKSVVDFENGNRGISSNNNRVITEHHRSFFQGLEKEENCCDDDYDSCFNQMGSNSKKRRLTSEQVQFLERNFEIENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKEYGALKSSYDKLKGDYENLQQQNDKLREEVNSLKNKLIPRDNNNNKEKEKSSSCGADATTTIAVNSPQKDEAEEPLMDLISISNTNSDDDGSNKLPLPIMVTCCKQQHQEDANSAKSDVLDSDSPQYCNDIVNNNINKTKNNIHHHSSASSFVEPADDSSQDDEDDNLSTENLLTLPCLPKVEEEEDACYPDKYTTCGFGFPVEDQAFCFWPY* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1401 375 Coils Coil 164 198 - -
Aev05g1401 375 Pfam Homeodomain 103 156 IPR001356 GO:0003677
Aev05g1401 375 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 5 375 IPR045224 GO:0003700
Aev05g1401 375 Gene3D - 96 165 - -
Aev05g1401 375 MobiDBLite consensus disorder prediction 198 234 - -
Aev05g1401 375 Pfam Homeobox associated leucine zipper 158 199 IPR003106 GO:0006355|GO:0043565
Aev05g1401 375 PRINTS Lambda-repressor HTH signature 129 138 IPR000047 GO:0003677
Aev05g1401 375 PRINTS Lambda-repressor HTH signature 138 154 IPR000047 GO:0003677
Aev05g1401 375 SMART HOX_1 101 162 IPR001356 GO:0003677
Aev05g1401 375 CDD homeodomain 103 159 IPR001356 GO:0003677
Aev05g1401 375 ProSitePatterns 'Homeobox' domain signature. 133 156 IPR017970 GO:0000981|GO:0006355
Aev05g1401 375 ProSiteProfiles 'Homeobox' domain profile. 98 158 IPR001356 GO:0003677
Aev05g1401 375 SUPERFAMILY Homeodomain-like 91 160 IPR009057 -
Aev05g1401 375 MobiDBLite consensus disorder prediction 307 330 - -
Aev05g1401 375 MobiDBLite consensus disorder prediction 198 215 - -
Aev05g1401 375 PANTHER HOMEOBOX LEUCINE ZIPPER FAMILY PROTEIN 5 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1401 Aev-Chr5 10187483 10190018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1401 55 208 Homeobox Transcription Factor Family AT4G40060 50.968 1.23e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev05g1401 Homeodomain 9.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1401 - K09338 adu:107489132 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1401 05 10187483 10190018 Aev05g1401 05 10187483 10190018 ECH
Aev03g0469 03 3429345 3430507 Aev05g1401 05 10187483 10190018 PCT