Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1400 ATGACTCGCAAGAGGGACTACTCTTCTCGTCACGCGCCCTACGCCAAGCGCCGCCGTCCTCCGCCGGAACCCGTCGAGGAGGAAGAGGACCGTCCCACCTTGAGGCCGGCGCCGCCTTCTGCGGTGGTGGTGATGGGGCTCCCTCAGGAGTGCTCCGTGCTTGACCTCAAGTCCCGCTTCGAGATCTACGGCCCAATCGCCCGCATCCGCATCGACCGTGACGCCGTCGGGTACATCACCTACCGGACCAAGGACTCCGCCGACGCCGCCATCGCCGCCGGCGCTGACACTTCCTTCGGAATCACCATTCACTCCAAAAAGGTTCAGGTGTTGTGGGCAACCGACCCGTTAGCAATGTGGAGGGAAGGAGTTGGTAACAACAAGGATAAAGGATCAATGTCGAAGCTTGTGCGCGCCGAGGTACCATTGAGGAGGCATGGAAGAGGTAATAGGCTCGCTTCGGCAATAGGGAATACCAAAACCAGTGAAGATAGCTCAGGTAGCTCAGTTCTTGAAGCTCCTTTCAAGGGCAGAGAAATTGTTGCTTATGATGATATCCTCTAG 564 0.578 MTRKRDYSSRHAPYAKRRRPPPEPVEEEEDRPTLRPAPPSAVVVMGLPQECSVLDLKSRFEIYGPIARIRIDRDAVGYITYRTKDSADAAIAAGADTSFGITIHSKKVQVLWATDPLAMWREGVGNNKDKGSMSKLVRAEVPLRRHGRGNRLASAIGNTKTSEDSSGSSVLEAPFKGREIVAYDDIL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1400 187 Gene3D - 2 117 IPR012677 -
Aev05g1400 187 CDD RRM_SF 42 84 - -
Aev05g1400 187 SUPERFAMILY RNA-binding domain, RBD 18 122 IPR035979 GO:0003676
Aev05g1400 187 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 93 IPR000504 GO:0003723
Aev05g1400 187 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 115 IPR000504 GO:0003723
Aev05g1400 187 MobiDBLite consensus disorder prediction 16 34 - -
Aev05g1400 187 MobiDBLite consensus disorder prediction 1 39 - -
Aev05g1400 187 SMART rrm1_1 41 111 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1400 1 187 Homeobox Transcription Factor Family AT1G27050 52.683 8.49e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1400 - - ccaj:109806897 278.485