Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1377 ATGGATCCCACTGCCATGATCAATGACGCTTCCTTTTCCCCCGGAACCCCCTCCAATACGGCGCCGTTTCACTTCCCGGAGATCTGGCACTTCCCTCCCCCGCCATTCGACTCATCCTCCTCCGTCGCCGCCACCGCCGGCCTCGGCCTCCGGACGCCGCAGTTCGCCCACCGAGGGCAGTTTGGGGATTTCGCTTCGTGTCCGACCCGGGACGTTCCGGGCAACGATCCGGTAGGTTCGGAGCACGGGTCGGGTCCGAACCATAACAATAGCAACAGAAAGAGGCGCGATTCCCAGGAGGAGGAGGAATCAACAACTAAGGGCGTGTCCACCAGCAACAATGGCGGTACCAATGCCAACGCCAACGGCGTGAGTGATGGTGGTGAAGGGAAGAGGGTGAAGGGATCATCAGGGAACAGGAATGAGAGTGTAAAAGGTGAAGGAGGAGAACACAGTTCAGGAAAGCTTGCGGAGCAACAGAATAATGAGCCTCCTAAGCAAGACTACATTCATGTGCGAGCAAGAAGGGGTCAAGCTACTGATAGCCACAGTCTTGCTGAAAGAGCTAGAAGGGAAAAGATTAGTGAAAGGATGAAAATTCTTCAGGATTTAGTCCCTGGCTGTAATAAGGTTATTGGGAAAGCTTTGGTCCTTGATGAGATAATTAATTATATCCAATCGCTTCAGCGCCAAGTAGAGTTTTTGTCAATGAAGCTTGAAGCAGTAAATTCAAGATTGACCCCTGGAATTGAAGTTTTTCCTCCTAAAGATTTTGATCAGCAAACATTTGATACAGCCGGCATGCCATTTCCTTCGCAAGCTACAAGAGAGTACAGCCGGGGTTCATCGCCGGAGTGGTTACATATGCAGGTAGGAGGTGGTTTCGAAAGAACAACATAG 900 0.5133 MDPTAMINDASFSPGTPSNTAPFHFPEIWHFPPPPFDSSSSVAATAGLGLRTPQFAHRGQFGDFASCPTRDVPGNDPVGSEHGSGPNHNNSNRKRRDSQEEEESTTKGVSTSNNGGTNANANGVSDGGEGKRVKGSSGNRNESVKGEGGEHSSGKLAEQQNNEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLTPGIEVFPPKDFDQQTFDTAGMPFPSQATREYSRGSSPEWLHMQVGGGFERTT* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1377 299 MobiDBLite consensus disorder prediction 105 124 - -
Aev05g1377 299 MobiDBLite consensus disorder prediction 88 104 - -
Aev05g1377 299 MobiDBLite consensus disorder prediction 133 152 - -
Aev05g1377 299 CDD bHLH_AtBPE_like 168 253 - -
Aev05g1377 299 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 246 IPR036638 GO:0046983
Aev05g1377 299 Pfam Helix-loop-helix DNA-binding domain 182 229 IPR011598 GO:0046983
Aev05g1377 299 MobiDBLite consensus disorder prediction 1 26 - -
Aev05g1377 299 SMART finulus 184 234 IPR011598 GO:0046983
Aev05g1377 299 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 299 IPR024097 GO:0006355
Aev05g1377 299 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 228 IPR011598 GO:0046983
Aev05g1377 299 Coils Coil 225 245 - -
Aev05g1377 299 MobiDBLite consensus disorder prediction 59 165 - -
Aev05g1377 299 Gene3D - 175 248 IPR036638 GO:0046983
Aev05g1377 299 PANTHER BNAC05G07950D PROTEIN 1 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1377 Aev-Chr5 9928753 9931898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1377 1 299 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 45.307 1.21e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g1377 HLH 2.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1377 - - lang:109332242 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1377 05 9928753 9931898 Aev03g0490 03 3555475 3557878 PCT