Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1364 ATGTCTCGCACGTGCTCACAGTGCGGCAACAACGGCCACAACTCCCGCACGTGCACCGATGGTTCCTCCGCCGCGGCCTCCGGCGGTGTATCACCGAGGGAGAACGGAATCATGCTGTTCGGCGTGCGAGTCACCGAAGGGAACTCCTTCAGGAAGAGCGCCAGTGTTCCTTGGACGGAGGAGGAGCATAGGTTGTTCTTATTGGGTTTGCATAAGGTTGGAAAAGGAGACTGGAGAGGGATTTCTAGAAACTTCGTCAAGACTCGGACGCCGACTCAGGTGGCGAGTCACGCTCAGAAATATTTCCTCCGTCGTCACAACCAGAATCGCCGCCGCCGGAGATCTAGCCTCTTTGATATCACAACTGATACGGTGATGGAATCATCTACAATACTAGAAGAAGAACAAGTTCAGCAAGAGACGGTGGCGGCGCCGCCCACGCCTCCCGCATATCCGCCGTCACATTACGGCAGCTTCCACGGCCCAGCTTTTCCAATCACTCTAGCTCCGGTGGTGCTTCCGGTGGCCGGCGGCGGTGAGAGAGCTTCAAAACCAATAAGGCCAACACCAATTTTGCCGGTGCCACCATCTTCCAAGATGGCCAATTTGAACTTGAAGGAAAAAGCTTCTCCGCTAATTGAGCCTCTTCCATTGTCTTTGAAGCTTCCGACGCCGCCGCCGTCAAAGGATCAGTCACCGGCCACTAGTAGCCACTCGTCGCCGTCCTCGTCGTCGTCGGCCTCAGCCTTTCAGGCTATGTCTGCCGGGAATTTCAATAGTGGAGGGGATAGCATTATTAGTGTTGCTTAA 810 0.5506 MSRTCSQCGNNGHNSRTCTDGSSAAASGGVSPRENGIMLFGVRVTEGNSFRKSASVPWTEEEHRLFLLGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESSTILEEEQVQQETVAAPPTPPAYPPSHYGSFHGPAFPITLAPVVLPVAGGGERASKPIRPTPILPVPPSSKMANLNLKEKASPLIEPLPLSLKLPTPPPSKDQSPATSSHSSPSSSSSASAFQAMSAGNFNSGGDSIISVA* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1364 269 MobiDBLite consensus disorder prediction 179 199 - -
Aev05g1364 269 MobiDBLite consensus disorder prediction 1 30 - -
Aev05g1364 269 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 55 104 IPR006447 GO:0003677
Aev05g1364 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 106 IPR017930 -
Aev05g1364 269 ProSiteProfiles SANT domain profile. 53 106 IPR017884 -
Aev05g1364 269 Pfam Myb-like DNA-binding domain 56 102 IPR001005 -
Aev05g1364 269 SMART sant 54 104 IPR001005 -
Aev05g1364 269 SUPERFAMILY Homeodomain-like 52 105 IPR009057 -
Aev05g1364 269 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE 51 266 - -
Aev05g1364 269 ProSiteProfiles Zinc finger CCHC-type profile. 5 20 IPR001878 GO:0003676|GO:0008270
Aev05g1364 269 MobiDBLite consensus disorder prediction 214 269 - -
Aev05g1364 269 Gene3D - 56 107 - -
Aev05g1364 269 MobiDBLite consensus disorder prediction 231 269 - -
Aev05g1364 269 CDD SANT 57 102 IPR001005 -
Aev05g1364 269 PANTHER TRANSCRIPTION FACTOR KUA1 51 266 - -
Aev05g1364 269 MobiDBLite consensus disorder prediction 1 29 - -
Aev05g1364 269 ProSiteProfiles Myb-like domain profile. 57 102 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1364 Aev-Chr5 9817258 9819258 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev05g1364 Myb_DNA-binding 2.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1364 - - gmx:780554 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1364 05 9817258 9819258 Aev05g1364 05 9817258 9819258 ECH