Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1349 ATGGAGAACCAAAACGTTGCCGTTTCCGAAGAGGTTCATGTCTTAGCCGTTGATGACAGCCTCGTCGATCGAAAGGTCATTGAGCGCTTGCTCAAAATCTCAGCTTGTAAAGTTACTGCTGTGGATAGTGGAATCAGAGCACTGCAATATTTGGGACTGGACGAACAGAGAAGCACCTCTGGTTTTGTGGATATAAAGGTGGATCTAATTATCACAGACTACTGCATGCCCGAAATGACCGGTTATGAATTGCTTAAAAAAATCAAGGAATCGTCCACTTTCAGGGAAATTCCAGTGGTCATTATGTCCTCTGAAAACGTTTTGCCGCGCATAGACAGGTGCTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAGTTATCGGACGTGAAGCGGTTGAAGAATTACATGACTACCACAAGGGATGTTAGATCCGGAAGCCATGACGGAAGCTACGGCGGCGATGGCGGCGGTGGTGGTGGGATCAATAAAAGGAAGCTATCAGATACATCTGATGTGTCATCATCTCCACCGTCCGTTTTTCAATCAGCAACTTCATCATCGCCGTCTGATTCTTCACCTTCTCAATCACCGTCGTTTTCCCCTTCATCTTCACCCAGCGTGCTTGATTCTCCAATCAGACGGCTTAAAATGACTAGCGCTGATTGA 675 0.4652 MENQNVAVSEEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQYLGLDEQRSTSGFVDIKVDLIITDYCMPEMTGYELLKKIKESSTFREIPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLKNYMTTTRDVRSGSHDGSYGGDGGGGGGINKRKLSDTSDVSSSPPSVFQSATSSSPSDSSPSQSPSFSPSSSPSVLDSPIRRLKMTSAD* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1349 224 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 222 IPR045279 GO:0009736
Aev05g1349 224 Pfam Response regulator receiver domain 14 132 IPR001789 GO:0000160
Aev05g1349 224 SMART REC_2 12 139 IPR001789 GO:0000160
Aev05g1349 224 CDD REC_typeA_ARR 14 135 - -
Aev05g1349 224 MobiDBLite consensus disorder prediction 143 224 - -
Aev05g1349 224 MobiDBLite consensus disorder prediction 169 212 - -
Aev05g1349 224 Gene3D - 12 152 - -
Aev05g1349 224 SUPERFAMILY CheY-like 12 135 IPR011006 -
Aev05g1349 224 ProSiteProfiles Response regulatory domain profile. 13 140 IPR001789 GO:0000160
Aev05g1349 224 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 7 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1349 Aev-Chr5 9666047 9667213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1349 9 216 Response Regulator Gene Family AT1G59940 58.257 3.92e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev05g1349 Response_reg 4.3e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1349 K14492 - gmx:100779833 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1349 05 9666047 9667213 Aev05g1349 05 9666047 9667213 ECH
Aev05g1349 05 9666047 9667213 Aev03g0506 03 3696763 3697724 PCT