Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1336 ATGAACAAATCATCATCATCAGAAAAACCTTCCTCTTCATCCTCCTCCTCAGCGTTGAAGCTTTTACGTTTCCCTTTGGCAGCTACAAGCAGAAGCAGCATCAATGAAGAACCACCCATGATCGTGTGTCCACTGTGTAAGCGCATATTCCACAATTTCCAAGCTCTGGGAGGGCACCAAAATGCACACAGGAGACAACGCCAAATGGCTATACTGACCCAACTTCATCATTATAGGGCACAGCAAGAACGACCAACACATTCTCAAATTGCTCATGATGATGCAATTCTTCATCACTTTGCGGTGGAGACACCTCAAGGTATGCGCGTTCCCCCTATAGTACTACAAGATCAAGTTCATGATGATGAAGTCGATCTTGAATTGAGACTTGCTACTACCTCCACCACTAAGGAGTCTACTGGGAAATAA 429 0.4476 MNKSSSSEKPSSSSSSSALKLLRFPLAATSRSSINEEPPMIVCPLCKRIFHNFQALGGHQNAHRRQRQMAILTQLHHYRAQQERPTHSQIAHDDAILHHFAVETPQGMRVPPIVLQDQVHDDEVDLELRLATTSTTKESTGK* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1336 142 ProSiteProfiles Zinc finger C2H2 type domain profile. 41 68 IPR013087 -
Aev05g1336 142 PANTHER ZINC FINGER PROTEIN 5 2 81 IPR044299 GO:0010090
Aev05g1336 142 PANTHER ZINC FINGER PROTEIN 6-LIKE 2 81 - -
Aev05g1336 142 ProSitePatterns Zinc finger C2H2 type domain signature. 43 63 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1336 Aev-Chr5 9559180 9559608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1336 9 70 C2H2 Transcription Factor Family AT1G24625 43.548 2.56e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1336 - - ccaj:109793205 82.8037