Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1333 ATGGGAAAGGATTTGTGTGATCATCACCATCATCATGATAATCTTTCCCCTGCAAGATGGGATTGTTGTGATAATAATGGAAACTCTGTTGAAAAGAGGCTAAGGCTTTTTGGCTTTGAGCTGAATCCATCATCATCATCATCAAACAAGAACAATAATGAAGGAGATGAAAGTGTGAACTCATCAAACTCTGTTTCATCAGGAGGAGACAACAAATCTGCATCACAACAAGAGAAGAACAATCTATCATCAGATGAGATCAGGAAATTTGAGTGCCAATACTGTTTGAAGGAGTTTGCAAATTCACAAGCACTTGGTGGGCATCAAAATGCACACAAGAAAGAAAGGATGAAGAAGAAAAGATTGCAACTTCAAGCAAGAAAAGCAACCATAAATTACTACCTACAACCTTTTCAAAACAGCCATGGATTCTTTTCTTACCATAAATCTAACAATAACAATAATAGTACCAATCATTGGTTCTATGACCCTTCTTCCTATAACTACTCTGACTTCACCTTTTGTGAAGACTCTCAAATTAGCTTCAATTCTAATGATCAAGATACCAATAAATGTAATAATAACTTTATTGGTGTTGATCATAAGAAGAAACCCAATTGGTATTCTCTGCCATCATCACATGATGCTACTTCTCAACAAGATTCTTGCATCTTTACTTTCTCCAATAATAATACTAATAATAGTAATGATAATAAAGGTTTGGATCTTCAATTAGGGCTCAATTTGGAGTCAAATACAAGCTCTGTAAGAAGGGCTTGA 780 0.35 MGKDLCDHHHHHDNLSPARWDCCDNNGNSVEKRLRLFGFELNPSSSSSNKNNNEGDESVNSSNSVSSGGDNKSASQQEKNNLSSDEIRKFECQYCLKEFANSQALGGHQNAHKKERMKKKRLQLQARKATINYYLQPFQNSHGFFSYHKSNNNNNSTNHWFYDPSSYNYSDFTFCEDSQISFNSNDQDTNKCNNNFIGVDHKKKPNWYSLPSSHDATSQQDSCIFTFSNNNTNNSNDNKGLDLQLGLNLESNTSSVRRA* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1333 259 Gene3D Classic Zinc Finger 63 142 - -
Aev05g1333 259 PANTHER ZINC FINGER PROTEIN 5 25 249 - -
Aev05g1333 259 ProSiteProfiles Zinc finger C2H2 type domain profile. 90 117 IPR013087 -
Aev05g1333 259 MobiDBLite consensus disorder prediction 41 81 - -
Aev05g1333 259 ProSitePatterns Zinc finger C2H2 type domain signature. 92 112 IPR013087 -
Aev05g1333 259 Pfam C2H2-type zinc finger 90 115 - -
Aev05g1333 259 MobiDBLite consensus disorder prediction 1 21 - -
Aev05g1333 259 MobiDBLite consensus disorder prediction 41 82 - -
Aev05g1333 259 SUPERFAMILY beta-beta-alpha zinc fingers 88 117 IPR036236 -
Aev05g1333 259 MobiDBLite consensus disorder prediction 1 18 - -
Aev05g1333 259 PANTHER ZINC FINGER PROTEIN 5 25 249 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1333 Aev-Chr5 9510431 9511210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1333 31 177 C2H2 Transcription Factor Family AT1G10480 39.506 4.25e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1333 - - adu:107488933 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1333 05 9510431 9511210 Aev05g1333 05 9510431 9511210 ECH