Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1331 ATGCCGGGGCATCGGTCGAAGTCGGAGAAGCACGCCGATGACGGCGGCGGCGGCGGCGCGAAGCCGCTCCGGAGGGATCCTTACGAGGTGTTGGGTGTGTCACGCAGCTCCAACGATCAGGAAATCAAGACCGCTTATCGTAAAATGGCACTCAAGTATCATCCTGATAAGAATGCTAATGATCCTAAAGCAGCTGATATGTTTAAAGAGGTTACATTTTCTTACAATATTTTGTCAGATCCTGACAAACGGCGTCAATATGACTCAGCTGGTTTTGAGGCTGTTGAATCAGATAGCCAAGAATTGGAGTTGGATCTTTCAAGTTTGGGTGCTGTGAATACAATGTTTGCTGCACTCTTTAGTAAACTTGGTGTGCCAATTAAGACAACTGTATCAGCAACTGTTTTGGAAGAGGCACTCAATGGTGTTGTGACCATTCGTCCACTTCCATTGGGACAATGTGTATCTAGAAGGGTTGAGAAGCAATGTGCACACTTCTATTCAGTTACAATAACAGAAGAGGAAGCACGAGCTGGATTTGTTTGTCGAGTGCAATCATCGGACAAAAGCAAGTTCAAGTTACTGTATTTTGATCAAGAAGACAATGGTGGATTAAGTCTTGCTCTCCAGGAAGACAGTGCAAAAACAGGGAAGGTTACCTCTGCTGGAATGTATTTTCTTGGGTTTCCTGTTTATCGGTTGGATCAGACAATGAATTCAATAGCTGCTGCAAAGGATCCAGATACATCATTCTTCAGAAAGCTGGATGGGTTCCAGCCCTGCGAATTAACAGAATTGAAGGCTGGTACCCATGTGTTCGCCATTTATGGTGACAACTTTTTCAAAAGTGCAAACTATACAATAGAAGTTCTGTGTGCCGCACCCTTTAGTGAAGAAAAAGAAAATTTAAGAAATATAGAAGCTGAAATTTTGTCTAAAAGGGCAGAAATATCGAAGTTTGAATCAGAATATCGAGAGGTACTGGCGCAATTCACAGAGATGACGAGCAGATATGCACATGAAATGCAAGCAATTGACGAGCTATTGAAACAGCGAAATGAAATACATGCATCATACAGTATTGCTCCTTTGAAACGGAGTTCAAGTAAGAGCAGGAGTAAAAGTTCCTCCAAGGAGGCAAAAGAAGATGGCCAAACAAGAGAGAAGAGGAGCACAAGAGATCGGCCAAAGAAGAAGCGATGGTATAACATCCACTTAAGAGTTGATAAGCGAAAGGCTTGCTAA 1245 0.4297 MPGHRSKSEKHADDGGGGGAKPLRRDPYEVLGVSRSSNDQEIKTAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSAGFEAVESDSQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGVVTIRPLPLGQCVSRRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEDNGGLSLALQEDSAKTGKVTSAGMYFLGFPVYRLDQTMNSIAAAKDPDTSFFRKLDGFQPCELTELKAGTHVFAIYGDNFFKSANYTIEVLCAAPFSEEKENLRNIEAEILSKRAEISKFESEYREVLAQFTEMTSRYAHEMQAIDELLKQRNEIHASYSIAPLKRSSSKSRSKSSSKEAKEDGQTREKRSTRDRPKKKRWYNIHLRVDKRKAC* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1331 414 Coils Coil 408 414 - -
Aev05g1331 414 CDD DnaJ 26 80 IPR001623 -
Aev05g1331 414 Pfam DnaJ domain 26 88 IPR001623 -
Aev05g1331 414 MobiDBLite consensus disorder prediction 1 20 - -
Aev05g1331 414 MobiDBLite consensus disorder prediction 360 402 - -
Aev05g1331 414 SMART dnaj_3 25 83 IPR001623 -
Aev05g1331 414 Coils Coil 296 323 - -
Aev05g1331 414 MobiDBLite consensus disorder prediction 1 36 - -
Aev05g1331 414 SUPERFAMILY Chaperone J-domain 25 95 IPR036869 -
Aev05g1331 414 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Aev05g1331 414 PRINTS DnaJ domain signature 63 83 IPR001623 -
Aev05g1331 414 PRINTS DnaJ domain signature 28 46 IPR001623 -
Aev05g1331 414 PRINTS DnaJ domain signature 46 61 IPR001623 -
Aev05g1331 414 PRINTS DnaJ domain signature 83 102 IPR001623 -
Aev05g1331 414 MobiDBLite consensus disorder prediction 372 391 - -
Aev05g1331 414 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 1 413 - -
Aev05g1331 414 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Aev05g1331 414 Gene3D DnaJ domain 20 109 IPR036869 -
Aev05g1331 414 PANTHER DNAJ DOMAIN-CONTAINING PROTEIN-RELATED 1 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1331 Aev-Chr5 9482518 9486795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1331 24 89 C2H2 Transcription Factor Family AT1G74250 42.254 9.01e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1331 - - gmx:100800929 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1331 05 9482518 9486795 Aev05g1331 05 9482518 9486795 ECH