Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1319 ATGGGTTCGAAAGGCCAAAGATGGAGCGAGCTTGAAGAAGACGACGAGAATCTCGATTTTCTCCTTCCGCAGAAGCAGGTGATAGGACCTGACCAGAACGGGATTAAGAAGGTGATTGAGTACAAGTTCAGCGACGATGGCAGCAAGGTCAAGATCACAACCACCACACGCACACGAAAGCTCGCAAACGCACGACTCAGCAAGCGCGCCGTTGAGCGCCGATCCTGGCCCAAGTTCGGCGACGCCGTACACGAGGATGTTGGTAGCAGGCTCACCATGGTCTCCACCGAAGAGATCCTCCTCGAGCGCCCTAAGCCTCTCGGTGCCAAAACTGAGGAACCAAAGGCTTCTGGTGACCCATTAGCAATGCAGAAAGGTGCTGTTCTTATGGTCTGTAGGACTTGTGGGAAGAAGGGTGACCACTGGACTTCAAGGTGTCCATACAAGGATCTTGCCCAGCCATCTGAGGGATTCGTTGACAAGCCTCCGGTGTCTGACTCTGCAACCGCTGCTCCTGGTTCAACAAAGGGAGCATACGTGCCACCTGGAATGAGAGCCGGTGCAGAGAGGACTGGATCGGACATGCGGCGCAGGAACGATGAGAATTCTGTCAGGGTCACCAACCTCTCGGAGGACACTAGAGAGCCTGATTTGCTCGAACTGTTCCGCCCTTTTGGCGCTGTGAGCAGAGTCTATGTTGCCATTGATCAGAAGACAGGCATGAGCAGAGGGTTCGGATTCGTTAACTTTGTAAACAGAGAAGATGCGCAAAGAGCTATCAACAAACTGAATGGTTATGGATACGACAATCTCATCCTCAGAGTTGAATGGGCCACCCCAAGGACAAACTAG 852 0.5293 MGSKGQRWSELEEDDENLDFLLPQKQVIGPDQNGIKKVIEYKFSDDGSKVKITTTTRTRKLANARLSKRAVERRSWPKFGDAVHEDVGSRLTMVSTEEILLERPKPLGAKTEEPKASGDPLAMQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPSEGFVDKPPVSDSATAAPGSTKGAYVPPGMRAGAERTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRTN* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1319 283 SUPERFAMILY RNA-binding domain, RBD 193 282 IPR035979 GO:0003676
Aev05g1319 283 CDD eIF3G 33 150 IPR024675 -
Aev05g1319 283 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 8 283 - -
Aev05g1319 283 MobiDBLite consensus disorder prediction 162 202 - -
Aev05g1319 283 Gene3D - 166 283 IPR012677 -
Aev05g1319 283 SMART rrm1_1 203 276 IPR000504 GO:0003723
Aev05g1319 283 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 202 280 IPR000504 GO:0003723
Aev05g1319 283 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 5 282 IPR017334 GO:0003743|GO:0005737|GO:0005852
Aev05g1319 283 Pfam Eukaryotic translation initiation factor 3 subunit G 26 151 IPR024675 -
Aev05g1319 283 PIRSF Transl_init_eIF-3_RNA-bind 2 283 IPR017334 GO:0003743|GO:0005737|GO:0005852
Aev05g1319 283 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 204 270 IPR000504 GO:0003723
Aev05g1319 283 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 8 283 - -
Aev05g1319 283 CDD RRM_eIF3G_like 203 278 IPR034240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1319 Aev-Chr5 9361845 9363848 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1319 7 281 Eukaryotic Initiation Factors Gene Family AT3G11400 69.481 1.19e-151 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1319 K03248 - gmx:100818725 494.197