Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1306 ATGAGTCATTTCCATCTTATTGAATGTTTCTTTTGGTACTTGTTAGGACATTATATCACAATCCTCAAACACAGTACGCATAAGATAGCGCCGATCATGCCATTCGGTTTGGTCTCAGCTTGGAACAAGCGCCGTCGAAGCAAGTCTGAAGATAATACAGACCCCTGGATTTACAAACCTGCGGAGCTTTGGCAGCTTGAAGAACATGTATCGCGACCAACAAAAAGGCTGCACGGATCATCTGTGTTCACACTCAAGGAAATGCATGAGGCAACATGTTCATTCAGTGAGGCAAATCTGCTTGGAAAAGGAGGATTTGGCAAAGTCTACCGGGGCACTTTGCGGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAAATGCCAGCAATCAAAGAAGCAGAAGGGGAACGGGAGTTCCGTGTTGAAGTTGATATTTTGAGCAGACTCGACCACCAAAATCTTGTTTCTTTGATAGGCTACTGTGCTGATGGAAAGCATAGATTCCTAGTATATGAATATATGCATAATGGGAACCTGCAAGATCATTTGAATGGAATCGGGGAAAGAAAAATGGATTGGCCTCTAAGACTCAAAGTGGCGCTGGGAGCTGCAAAAGGGCTAGCTTATCTCCACTCAGGTTTTGATGTTGGAATTCCTATTGTTCATAGAGATTTCAAATCAACCAATGTTCTCTTGGATGCCAACTTTGAAGCAAAGATATCAGACTTTGGCCTCGCCAAGTTAATGCCAGAAGGACAAGAGACACATGTGACAGCCAGAGTACTTGGTACCTTTGGCTACTTTGATCCTGAGTATACATCGACTGGGAAACTTACTTTACAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTCTGGAACTTTTGACTGGACGTCGAGCAGTTGATCTAAACCAGGGTCCTAATGATCAAAACCTAGTACTGCAGGTGAGGCATATACTAAATGATCGCAAGAAGCTACGTAAGGTGATAGATCCAGAGATGGCCCGAAACTCTTATACCATTCAGTCTATTGTCATGTTTGCCAATCTGGCATCAAGATGTGTCAGAACTGAGAGTAATGAAAGACCTTCAATGGCGGAATGTGTAAAAGAACTCCTAACAATTATCTATACAAATTCAAAAGGCTTGGGAATGGTTATGCATAGTTTGAGAATGATCTAG 1182 0.423 MSHFHLIECFFWYLLGHYITILKHSTHKIAPIMPFGLVSAWNKRRRSKSEDNTDPWIYKPAELWQLEEHVSRPTKRLHGSSVFTLKEMHEATCSFSEANLLGKGGFGKVYRGTLRSGEVVAIKKMEMPAIKEAEGEREFRVEVDILSRLDHQNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIGERKMDWPLRLKVALGAAKGLAYLHSGFDVGIPIVHRDFKSTNVLLDANFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLRKVIDPEMARNSYTIQSIVMFANLASRCVRTESNERPSMAECVKELLTIIYTNSKGLGMVMHSLRMI* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1306 393 Pfam Protein kinase domain 96 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g1306 393 Gene3D Phosphorylase Kinase; domain 1 63 173 - -
Aev05g1306 393 SUPERFAMILY Protein kinase-like (PK-like) 81 378 IPR011009 -
Aev05g1306 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Aev05g1306 393 CDD STKc_IRAK 101 372 - -
Aev05g1306 393 ProSiteProfiles Protein kinase domain profile. 95 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g1306 393 PANTHER OS01G0750732 PROTEIN 33 393 - -
Aev05g1306 393 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Aev05g1306 393 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 33 393 - -
Aev05g1306 393 Gene3D Transferase(Phosphotransferase) domain 1 174 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1306 Aev-Chr5 9260515 9263400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1306 78 376 Receptor kinase-like Gene Family AT3G58690 47.368 6.36e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Aev05g1306 Pkinase 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1306 - - gmx:100796654 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1306 05 9260515 9263400 Aev05g1306 05 9260515 9263400 ECH