Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1294 ATGTCTATGCTTCACTCTCAAATTCATGGTTCTATGACTAGCCCTCCAATTCTCTCTCCATATTCTTCAACTTACAATTCTAATTACCAGAAACAATCATCTTCTCCACCCTCAGATTTTGCCTCATCTGGGAGCAGACTAAGCCCTGCAATTCTCTTCATCATAATCATTCTAGCTGTTCTGTTTTTCCTCTTGGGATTCCTTCACTTGCTTGTTAGGTTCCTCACAAAGCACAGGTCTTCTTCTTCTTCATCAGTTTCTCAGTCCAATAGGCACCACACTGACATGTCTGAATCTGATGCATATCAGAGACAGTTGCAGCAGCTATTCCACCTCCATGACTCAGGCTTGGATCAGGCCTTTATTGATGCACTCCCAGTGTTCCTCTACAAGGAGATAATAGGATTGAAGGAGCCTTTTGATTGTGCTGTTTGCCTCTGTGAGTTCTTGGAACAGGACAAGCTTAGGTTGCTTCCAAATTGCAACCATGCTTTCCATATTGACTGCATTGACACATGGTTGCTTTCAAATTCAACTTGTCCTCTTTGTAGAGGGACCCTTTATGCACCTGGATTCTCCTTTGAAACTCCATTATTTTTTGACTATTTTGAGGGTCCATTTGAGGAAGATGGGGTTTCAGGAAGTGTTGGTTCTGTTTCTGCTAATAACAAGCAGCCTGCAGAAAGTCACATTATGAATGGGAAAAGGGTTTTTTCTGTTAGGCTTGGAAAGTTTAGAAGCTCAAATAATGTTGATGTAGTTGAAAGAATTGAAGGAGAGAGTAGTACTAGTAATGGTAATTTGGATGCTAGAAGATGCTATTCAATGGGGTCTTATCAATATGTTGTTGCTGATTCTGATCTGAGAGTGGCTTTGTGCCCTAAAAGAGGTGATGGTGGAATCAGTTGTAGTATGAGACAATTGATGAAAGGGAAAATAGGCACAAATGGGAATTGTTCCATTGATGGAGATGTTGAGGGCAAGAAAATTAGCATTGCAAGGAAAGGTGATAGCTTTTCTGTTTCCAAGATCTGGCAATGGTCTAAGAAGGACAGGTTAACAAGTTCATCAGAGACCAATTTCAATAATAATTCTGCTGTCACAGCAAATTTGCCATGGATGAATAAGGCCAGAGGTACATGA 1143 0.4068 MSMLHSQIHGSMTSPPILSPYSSTYNSNYQKQSSSPPSDFASSGSRLSPAILFIIIILAVLFFLLGFLHLLVRFLTKHRSSSSSSVSQSNRHHTDMSESDAYQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIIGLKEPFDCAVCLCEFLEQDKLRLLPNCNHAFHIDCIDTWLLSNSTCPLCRGTLYAPGFSFETPLFFDYFEGPFEEDGVSGSVGSVSANNKQPAESHIMNGKRVFSVRLGKFRSSNNVDVVERIEGESSTSNGNLDARRCYSMGSYQYVVADSDLRVALCPKRGDGGISCSMRQLMKGKIGTNGNCSIDGDVEGKKISIARKGDSFSVSKIWQWSKKDRLTSSSETNFNNNSAVTANLPWMNKARGT* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1294 380 SMART ring_2 142 183 IPR001841 -
Aev05g1294 380 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 6 365 - -
Aev05g1294 380 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 189 IPR013083 -
Aev05g1294 380 Pfam Ring finger domain 141 184 IPR001841 -
Aev05g1294 380 CDD RING-H2_PA-TM-RING 141 184 - -
Aev05g1294 380 ProSiteProfiles Zinc finger RING-type profile. 142 184 IPR001841 -
Aev05g1294 380 SUPERFAMILY RING/U-box 121 190 - -
Aev05g1294 380 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1294 Aev-Chr5 9149659 9150801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1294 66 357 C3H Transcription Factor Family AT2G18650 39.375 5.38e-59 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1294 - - gmx:100805154 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1294 05 9149659 9150801 Aev03g0535 03 3911716 3912882 PCT