Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1265 ATGTCTTTCCTTTCCTCAGTACCAGGCAACCAAAGATCAGGTATGTTTCGGTCACTCATGTATGAAGCAGTGGGACGGAGCATAAACCCTGTTAGTGGAGCACTCGGCCTTCTCTGGACGGGCAACTGGCATGCGTGCCAGATGGCCGTCCAAAGAGTTCTCCGAGGAGAGCCGTTATTATTGTGCCAAGAGGATGAGGATGCCTTTGCCTTTCATCAATCTCAGCCTTCTCATTCCGCTCCTCCTACAGGTTTAGAGGAGGAGGAGAACTATGAAAAATTAGCAGAAGAAGAAGAAGTAGCAGCAGGACACTCTGCTTCTCAATCAAACCTCCTTAAACTCTTCTTTTGA 351 0.4815 MSFLSSVPGNQRSGMFRSLMYEAVGRSINPVSGALGLLWTGNWHACQMAVQRVLRGEPLLLCQEDEDAFAFHQSQPSHSAPPTGLEEEENYEKLAEEEEVAAGHSASQSNLLKLFF* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1265 116 ProSiteProfiles LOB domain profile. 1 59 IPR004883 -
Aev05g1265 116 MobiDBLite consensus disorder prediction 72 109 - -
Aev05g1265 116 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 116 - -
Aev05g1265 116 Pfam Lateral organ boundaries (LOB) domain 2 52 IPR004883 -
Aev05g1265 116 PANTHER LOB DOMAIN PROTEIN 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1265 Aev-Chr5 8903669 8904019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1265 1 59 AS2 family AT5G67420 62.712 2.36e-23 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev05g1265 LOB 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1265 - - gmx:100816269 103.219