Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1254 ATGGAAGCAGCAACAGAAACTCTGATAGGTTATCAGTTCCACTACTATTTGGCTACTAACAGCAAGTGCATCAAAATCTTTTGGGGTTTGATTCTTCTATTGGCTTTATCCAACTTAGTTGCATCAAATGGCATTGTTAAGAGCTTACCAGGCTTCCCTGGCGAGCTACCTTTCCTACTTGAAACTGGGTACATTGGCGTAGGCGAAGTAGAAGAGGTTCAGCTATTTTATTACTTCATTGAGTCGGAGGGGCGGCCAACAGATGATCCTCTTGTGCTTTGGCTTTCTGCAGGCCCTGGTTGCTCTGCTCTATCTGCTATTGTCTATGAAATTGGTCCAATAAGTTTTGATTACCAAAGGTCTAGTGGGGGATGCAAACCAGTTCTAGTGTTGAATGAATACTCTTGGACTAAGTTTGCCAACATTATTTTCTTGGATGCACCTGCTGGTACTGGATTTTCATATGCAAAAACTTCAGCAGGATACAACACTAGTGATACAAAATCAACTGCACATATTTATGTGTTTCTGAGAAAGTGGCTTCTGGCTCACCCAAACTTTCAAACAAATCCTATCTACATTGCTGGTGATTCTTATTGTGGAATTACAGTTCCAGTTATTGTCAAGAAAATTTCTGATGGTAACAAAGTTGGAAACATGCCACCAATCAACCTCAAAGGTTATGTTCTAGGAAACCCATTAACTGATGCCAGATATGATATAAACTCAAGAGTTAAGTTTGCCCACAGAGTTGGACTTCTATCTGATGAACTCTATGAGGAAACTAAACTTCATTGTCGCGGAGAATATGTTCACCCAAATAGAAGTGTTGCTAGATGCATTGAGCGTCTTGATATGGTCAATCTGTGCCTGAAAGAAATATACAGTCCCATGGTATTGGAACCGAAGTGTAGCGCTCTCTATCCAAAGCCAAACAAGCTTAACTGGGGTTCAAGTTCAAGCAATGATGGGATAAATACCTCAGACACACTCCTTTCAGAAGTTAATCCTATTAGTCGATGGTGCAGGGATTATAACTATTTGTTGGTAAACATCTGGGCTAATGACAAAGAAGTACAAGAAGCTCTACACGTCAGAAATGGAACTATAGAAAGGTGGGACATGTGTAATAAAAGCTTATCATATGTGCATGACATGATAAGTAGCGTTGATTATCACCGGAACTTTACCAGCGAAGACCTCAGAGCTATTGTTTATAGTGGAGATCATGATCTGGTTGTTCCATATGTGGGCACCGAGGAATGGATTCAATCTCTGAATTTGACTGTTTCTTCCAATGATGAGTGGAGGCCATGGTATCTCAATGGACAAGTAGCAGGTTACACGGAGACGTACAAAGGGAGGAAATACAGTATAACATTTGCTACTGTAAAGGGAGGAGGTCACACAGCTCCAGAGTACAAGCCCAAGGAATGCTTTAACATGATTAGCAGATGGTTTGCTTATTACTTTCTTTAG 1479 0.407 MEAATETLIGYQFHYYLATNSKCIKIFWGLILLLALSNLVASNGIVKSLPGFPGELPFLLETGYIGVGEVEEVQLFYYFIESEGRPTDDPLVLWLSAGPGCSALSAIVYEIGPISFDYQRSSGGCKPVLVLNEYSWTKFANIIFLDAPAGTGFSYAKTSAGYNTSDTKSTAHIYVFLRKWLLAHPNFQTNPIYIAGDSYCGITVPVIVKKISDGNKVGNMPPINLKGYVLGNPLTDARYDINSRVKFAHRVGLLSDELYEETKLHCRGEYVHPNRSVARCIERLDMVNLCLKEIYSPMVLEPKCSALYPKPNKLNWGSSSSNDGINTSDTLLSEVNPISRWCRDYNYLLVNIWANDKEVQEALHVRNGTIERWDMCNKSLSYVHDMISSVDYHRNFTSEDLRAIVYSGDHDLVVPYVGTEEWIQSLNLTVSSNDEWRPWYLNGQVAGYTETYKGRKYSITFATVKGGGHTAPEYKPKECFNMISRWFAYYFL* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1254 492 ProSitePatterns Serine carboxypeptidases, histidine active site. 459 476 IPR033124 GO:0004185
Aev05g1254 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 459 472 IPR001563 GO:0004185|GO:0006508
Aev05g1254 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 155 IPR001563 GO:0004185|GO:0006508
Aev05g1254 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 144 IPR001563 GO:0004185|GO:0006508
Aev05g1254 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Aev05g1254 492 Pfam Serine carboxypeptidase 50 487 IPR001563 GO:0004185|GO:0006508
Aev05g1254 492 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 18 20 491 - -
Aev05g1254 492 Gene3D alpha/beta hydrolase 55 490 IPR029058 -
Aev05g1254 492 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 491 IPR001563 GO:0004185|GO:0006508
Aev05g1254 492 SUPERFAMILY alpha/beta-Hydrolases 46 488 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1254 Aev-Chr5 8824941 8828565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1254 349 488 Calmodulin-binding Proteins AT2G22960 50.000 1.02e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1254 K16296 - jre:108983123 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1254 05 8824941 8828565 Aev05g1254 05 8824941 8828565 ECH