Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1225 ATGGGCTTCAATAGGCTGATGGAAGCTTGGGCTTATCTTTTGATACTCTCCATAGCTGCTATCACAAGCTCATCAGCACTTATTGCTTCTTATCTCATCCAACCCACTTCTTCCTTCTCCGACCTCTGTGACCATGCCCTTGACAAAGCATCCTGCTTAGCCCACATCTCAGAAATAGCTCATGGCCCCATCTTAGCCACTACTAGAGACCCCAATAACCACTTCACTCTGCTCCAATCCTTCTTAATCAACTCCATTTCACTGCACATAGAGAAAGCCATGGACGCAGCCAAAGCTACCAAATCCCGCGTTAATAGTCCCAAGGAGGAATCTGCTCTGCATGTGTGTGAGGAGCTCTTGGACTCTTCCAAAAACAGAGTATTTGACTCAATGGTGGCTCTGACAAAAAGGACCAATCTTTCACTTCAAGATGCACACGCGTGGCTGAGCAGCGTGCTCACAAATCATGTCACTTGCTTGGACGAATTGGAGGGATCTGCTCGTGATCGTGATGCCCTTTTGGAGTCTGAGCTTGAGGATTTAATATCAAGGTCAAGAACCTCTCTGGCTATTCTGGTTGCTGCTCTGCCTCCAAAAGGGGAAAGTGATGGGCATGTTCAACAACTCATTGAGGAGGCACTAGATGGGGAATTTCTTCCTTGGTGGGTGACACGCAACGATCGTAAACTCTTGGAGCGTTGGAGTGGGAAGATGAAGGCGAATGTGGTGGTGGCTAAGGATGGGAGTGGCAAGTTCAAGACGGTGGCAGAGGCTGTGGCATCAGCACCTGATAACAGCAAGACGAGGTACGTAATCCATGTGAAGAAGGGGACGTACAAAGAGAATGTTGATATTGTTTCAAGGAAGAAGAATTTGATGCTGTTAGGTGATGGCATGGACAAGACAATAATCACTGGAAGCTTGAATTTTGTGGATGGTACAAACACCTTCAGAAGTGCCACTGTTGGTTCGTTTATTCTCACCTCTAATTCATCATCCCGCTCCTGCTAG 1011 0.4718 MGFNRLMEAWAYLLILSIAAITSSSALIASYLIQPTSSFSDLCDHALDKASCLAHISEIAHGPILATTRDPNNHFTLLQSFLINSISLHIEKAMDAAKATKSRVNSPKEESALHVCEELLDSSKNRVFDSMVALTKRTNLSLQDAHAWLSSVLTNHVTCLDELEGSARDRDALLESELEDLISRSRTSLAILVAALPPKGESDGHVQQLIEEALDGEFLPWWVTRNDRKLLERWSGKMKANVVVAKDGSGKFKTVAEAVASAPDNSKTRYVIHVKKGTYKENVDIVSRKKNLMLLGDGMDKTIITGSLNFVDGTNTFRSATVGSFILTSNSSSRSC* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1225 336 SMART PMEI_2 34 191 IPR006501 GO:0004857
Aev05g1225 336 SUPERFAMILY Pectin lyase-like 238 322 IPR011050 -
Aev05g1225 336 PANTHER PECTINESTERASE 20 324 - -
Aev05g1225 336 TIGRFAM PME_inhib: pectinesterase inhibitor domain 16 185 IPR006501 GO:0004857
Aev05g1225 336 Gene3D - 235 332 IPR012334 -
Aev05g1225 336 CDD PMEI-like_4 51 194 - -
Aev05g1225 336 Pfam Pectinesterase 241 323 IPR000070 GO:0030599|GO:0042545
Aev05g1225 336 PANTHER PECTINESTERASE 20 324 - -
Aev05g1225 336 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 191 IPR035513 -
Aev05g1225 336 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 194 IPR035513 -
Aev05g1225 336 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
Aev05g1225 336 Pfam Plant invertase/pectin methylesterase inhibitor 40 172 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1225 Aev-Chr5 8625281 8626291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1225 14 324 Carbohydrate Esterase AT1G11580 43.827 2.99e-73 235