Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1224 ATGGCTACCCAACATAATCATCCTTTGCTAGATAAGCCCAAAAAATCTGTTTATTCCAAAACTGCCCTCTCAATCCTCCTCGCTTTTGTTGTTGTTGCTGTTAGCTTATCAGCCCTTGTTGCTTCTAACCTCATCAAACCCACCTCCTTCCAATTCTTCAATCTCTCCTCTTCTCACAGTAATGTGATCTGTGAGCATGCCCTTGACAAAGCATCATGCTTAGCCCATGTCTCAGAAGTAGCTCCTCCTCATCAATTAAACAAGCTCGCTCTGCTCCAATCTGTCCTAACGAAGACCACCTCACACATTCAAAATGCTATGGACACAGCCAAAGCTCTTAAACTCCGCCTTAACAGTCCCAAAGAGGAAGCATCTCTGCATGTCTGTGAGGAGCTCTTGGACTTGTCCAAGGACAGAGTATTTGACTCAATGGTGGCTCTAACCAAAAGGACCACTAATTCACTTCAAGATGCCCACACGTGGCTAAGTAGCGTGCTCACTAACCACGCCACGTGCTTGGATGGACTAGAGGGGTCTGCTTTGGCTCTTATGGAGGCTGAACTCGAGGACTTGAAATCGAGAGCAAGAACCTCTCTGGCCATGCTTGTTGCTGCTCTGCCTCAACAGAGTAGTGAGAAACTGATTGAGGAGCCACTGAATGGAGATTTCCCCTCGTGGGTGACGCGAAGGGATCGGAGGCTATTGGAGGCGAAGGCTGCGGATATAAAGGCGGATGTGGTGGTGGCTAAGGATGGGAGTGGCAGGTTCAAGACGGTGGCAGAGGGTGTTGCATCGGCACCTGATAATGGAAAGACAAGGTATGTTATATATGTGAAGAAGGGGACTTATAAGGAGAATGTTGAGATTGGTAAGAAGAAGAAGAACGTGATGCTTGTGGGAGATGGTATGGATGCAACAATAATCACAGGAAGCTTGAATGTTGTCGATGGAAGTACCACCTTCAAGTCTGCCACCGTTGCATTCTCCTACGTTTGA 996 0.4749 MATQHNHPLLDKPKKSVYSKTALSILLAFVVVAVSLSALVASNLIKPTSFQFFNLSSSHSNVICEHALDKASCLAHVSEVAPPHQLNKLALLQSVLTKTTSHIQNAMDTAKALKLRLNSPKEEASLHVCEELLDLSKDRVFDSMVALTKRTTNSLQDAHTWLSSVLTNHATCLDGLEGSALALMEAELEDLKSRARTSLAMLVAALPQQSSEKLIEEPLNGDFPSWVTRRDRRLLEAKAADIKADVVVAKDGSGRFKTVAEGVASAPDNGKTRYVIYVKKGTYKENVEIGKKKKNVMLVGDGMDATIITGSLNVVDGSTTFKSATVAFSYV* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1224 331 Pfam Plant invertase/pectin methylesterase inhibitor 63 200 IPR006501 GO:0004857
Aev05g1224 331 Gene3D - 239 330 IPR012334 -
Aev05g1224 331 PANTHER PECTINESTERASE 44 327 - -
Aev05g1224 331 PANTHER PECTINESTERASE 44 327 - -
Aev05g1224 331 SUPERFAMILY Pectin lyase-like 243 328 IPR011050 -
Aev05g1224 331 ProSitePatterns Pectinesterase signature 1. 270 289 IPR018040 -
Aev05g1224 331 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 63 195 IPR035513 -
Aev05g1224 331 CDD PMEI-like_4 72 204 - -
Aev05g1224 331 TIGRFAM PME_inhib: pectinesterase inhibitor domain 36 181 IPR006501 GO:0004857
Aev05g1224 331 SMART PMEI_2 55 201 IPR006501 GO:0004857
Aev05g1224 331 Pfam Pectinesterase 245 328 IPR000070 GO:0030599|GO:0042545
Aev05g1224 331 Gene3D Invertase/pectin methylesterase inhibitor family protein 61 204 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1224 Aev-Chr5 8615017 8616549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1224 6 327 Carbohydrate Esterase AT1G11580 46.828 2.72e-85 266