Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1222 ATGGACAAACCAGATAGGAACACGATCAACAACACTTCTCTCTCTGATTCTGAGGATTCATCTTTATTCAAATACATCAACAATATGTCTCCTCTAAAGCCTGTTAAACCTGCTTATACTCCTCTGACTTTCAACTCAATTGGCTTTTCATCCCCACCTTATGTTTTCACATCCCTTGAAGATGTGGGTAGATTTTTTTCAAGTGATGAAGAGGCTCTTGCAGATGCAAATAATAACTCGACTGAGTTACAAGATAATGCTCATCAAGGAGTTTCTGTAGATGATGGCACAGAGTTCTCATTTCGGCAACCACCACAAGGCTCTGATTGTCCTCCACTGCTTGCTGCTGATGAGCCTAACTCTCTTTTGCCCTTGCTTGGTGAGACAGCAGCATCCCATGATGCCAACGTTCCGAAAGGACGTGAAGCAAATTCTGTTGAGGGCGAGCCGAAGAGTGAAGGCCAAGAACTTAATTGGGATTCTTATATTGATGATCCCACTGATGATGTGTTAAGTTTTAATCCCGATGAAGAAATCTTTAGGCCTCCTTCAATGCTGAACCAAGTGGTCGATTATATGTCCGTGATAACACAATATCTGCTCAATGATGAGAGCGAAGTTGATCCAGCTCTTCCTCATCCTGATGAGCGCATAGCAGCAGCTGCTGACAGAGACCACACGCAGGACAATACCAGTGTTGCTTTGGTGACTGGCAATACAAATCAGAAGGTGGATTTTTTCCAGCCATGTGGTGAAGATCTCAATCATCGGATTAGCCCCAACTGCAAAAGGAAAAGGCAAGTGTTGTTTCTGATTATCATTGCCCCTTTATATTTAATAATCTTCGTCCCTTTATTTTCTACTTTCCCATTAGCTTCATACCAAGTTGGATGGGCAGGGCTAATGAGTTGGAGCCGGCTGAGTTACTGTGAGTGCTTTGCTGCTGGTGTCTACTGCACAGCTCCATGTTCTTGCAAGGGCTGCTTCAATTTACCTATTCATGAGCAAATAGTGCTTCAATCTCGTAATGAGATTATGATTCGAAACTCTCAAGCATTTGCTCCTAAAGTCATTAGCTCTGACTCTGCACATGAAACTGAGTTTGACCCAAATAAAACTCCGACTTTAGCACGACATACAAGAGGATGCAACTGCAAGAAATCAAGCTGCAATAAGAAATACTGTGAATGTTTTCAGGGTGGTGTTGGTTGCTCCAAAATTTGCAAATGTGATGGGTGCAAGAATGACTACGGTAGAAGGGATGAAAAAAATGGCCTAGTGTTTTGTGGGAGTGAATTGGGTGTCATTGTTCTCCGGCCAAACACCAATGTTAAGGGCTCCGATGATGACGTCACTTTCCAAGCTCAGCTCCGAGAAGAGATCACCATGCTCCTGTCGAGTCCAAGGAACACCACCACCACTGCCGCCAGATTGCGATCGCGAAGGGCCACGCGAAGTCGAACTGTAGCAACAGCAAAAGCTGTTAGACGCGATTGTGGAAGAAAGAGAACTCGCACGATTGCAGATGAATGA 1533 0.4416 MDKPDRNTINNTSLSDSEDSSLFKYINNMSPLKPVKPAYTPLTFNSIGFSSPPYVFTSLEDVGRFFSSDEEALADANNNSTELQDNAHQGVSVDDGTEFSFRQPPQGSDCPPLLAADEPNSLLPLLGETAASHDANVPKGREANSVEGEPKSEGQELNWDSYIDDPTDDVLSFNPDEEIFRPPSMLNQVVDYMSVITQYLLNDESEVDPALPHPDERIAAAADRDHTQDNTSVALVTGNTNQKVDFFQPCGEDLNHRISPNCKRKRQVLFLIIIAPLYLIIFVPLFSTFPLASYQVGWAGLMSWSRLSYCECFAAGVYCTAPCSCKGCFNLPIHEQIVLQSRNEIMIRNSQAFAPKVISSDSAHETEFDPNKTPTLARHTRGCNCKKSSCNKKYCECFQGGVGCSKICKCDGCKNDYGRRDEKNGLVFCGSELGVIVLRPNTNVKGSDDDVTFQAQLREEITMLLSSPRNTTTTAARLRSRRATRSRTVATAKAVRRDCGRKRTRTIADE* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1222 510 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 381 416 IPR005172 -
Aev05g1222 510 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 308 330 IPR005172 -
Aev05g1222 510 MobiDBLite consensus disorder prediction 78 93 - -
Aev05g1222 510 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 60 IPR044522 GO:0003700
Aev05g1222 510 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 1 60 - -
Aev05g1222 510 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 309 426 - -
Aev05g1222 510 ProSiteProfiles CRC domain profile. 299 418 IPR005172 -
Aev05g1222 510 MobiDBLite consensus disorder prediction 78 119 - -
Aev05g1222 510 MobiDBLite consensus disorder prediction 131 163 - -
Aev05g1222 510 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 309 426 IPR044522 GO:0003700
Aev05g1222 510 SMART CXC_2 309 334 IPR033467 -
Aev05g1222 510 SMART CXC_2 378 419 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1222 Aev-Chr5 8592386 8595089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1222 309 421 CPP Transcription Factor Family AT4G14770 68.421 3.51e-47 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aev05g1222 TCR 6.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1222 - - cpap:110814046 208.379