Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1208 ATGGAGCTTCAAGGCCGCTCAGATCAGTGCCTCCCTGAGAGGAAAGGCCAGAAGAGGAAGCTCGAGGATGAATTCGACGACCAACGCCAGATCTCCGCTCCTCCCACCGGCGACGCCCGCGAAGCACTTCTCTCCGACGTCAAGGACCAAGTCTCCATCCTCAACTCCTCTTTCTCTTGGAAAGAGGCCGATCGAGCCGCCGCCAAGCGCGCCACTCACGCGCTTGCCGATCTTGCCAAAAACGAGGAAGTGGTGAACGTGATTGTTGAAGGAGGCGCAATTCCTGCTCTGGTTCAGCACCTCCAAGCGCCTCTGGAAGAGGATGACCTTGTTCAGAGGCCTTTGCCGTTCGAGCACGAGGTCGAGAAAGGGAGTGCTTTCGCTCTTGGTCTTCTTGCCGTTAAGCCTGAACACCAACAGCTCATTGTTGACAATGGTGCCTTAAAACTTCTTGTTGATCTTCTGAAGAGGCATAAGAATGGCTTAACATCTCGTGCCATTAATAGTCTCATTCGTAGGGCAGCAGATGCAATCACTAATCTTGCTCATGAGAACAGCAGCATTAAAACTCGAGTCAGGATGGAAGGTGGGATTCCACCCCTTGTTCATTTACTTGAATTTGCTGATACAAAGGTGCAAAGAGCAGCTGCTGGTGCATTGCGAACCCTGGCCTTTAAAAACGATGAAAATAAAAATCAGATTGTTGAATGCAATGCTCTTCCAACTCTGATTCTAATGCTTCGTTCAGAGGATGCTGCTATTCATTATGAAGCGGTCGGTGTGATTGGAAATCTGGTTCACTCCTCCCCCAATATTAAGAAAGAAGTTCTTCTAGCTGGAGCTTTACAACCTGTTATCGGGTTGCTTAGTTCCTGTTGCTCTGAAAGCCAGAGGGAAGCAGCCTTGTTACTTGGTCAGTTTGCTGCGACTGATTCAGACTGCAAGGTTCACATTGTACAAAGAGGTGCTGTCCGACCTCTGATAGAAATGCTTCAATCCCCTGATGTGCAGCTCCGAGAGATGTCTGCTTTTGCATTGGGGAGATTGGCCCAGGACACCCATAATCAAGCTGGCATTGCACACAATGGTGGCTTAATCCCATTACTGAAGCTTCTTGACTCAAAAAATGGGTCTTTGCAACATAATGCTGCTTTTGCTCTTTATGGGCTTGCAGATAATGAGGATAATGTGTCAGATTTTATTAGGGTAGGTGGAATTCAGAAATTACAGGATGGAGAGTTTATTGTTCAAGCAACTAAAGATTGTGTTGCAAAGACATTGAAAAGATTAGAAGAGAAGATACATGGCCGTGTGCTCAACCATTTGTTATATCTTATGCGAGTTTCAGATAAGGCTTTCCAAAGAAGAGTGGCTTTGGCCCTTGCTCATCTTTGTTTAGCAGACGATCAGAAAAAAATATTCATTGATCACCATGGTTTGGAGTTGCTTATTGGGCTTCTTAGCTCATCCAGCCCTAAGCAGCAGCTTGAGGGTGCTGTTGCTTTGTTCAAGGTGGCAAATAAAGCTATGACTTTGTCTCCCGTAGATGCTGCTCCTCCTTCTCCAACACCCCAGGTCTATTTAGGAGAGCAATATGTAAACAATTCTACCTTGTCCGATGTTACATTTTTGGTTGAAGGCAAACGGTTTTATGCTCACAGAATCTGCCTGCTTGCATCTTCAGATGCATTTCGTGCAATGTTTGATGGTGGTTATAGGGAGAAGGATGCAAGGGACATAGAGATTCCAAATATTAGATGGGAGGTCTTTGAGATGATGATGAGATTTATATATACTGGGTCAGTTGATGTCACTCTTGATATTGCCCAAGATCTCCTCCGAGCTGCTGATCAGTATCTTTTAGAGGGACTTAAGAGACTATGTGAATACACAATTGCACAGGATATATCACTGGAGAATGTGTCAAGTATGTATGAACTTTCGGAAGCTTTTAATGCTATATCATTGCGGCACACATGCATCCTTTTTATCTTGGAGCAATTTGATAAATTGAGTGCAAGGCCAGGACACACTCATCTGATTCAGCGCATAACGCCGGAGATCCGCAATTACTTTGTTAAAGCTCTCACGAAGGCCAATTCCCACATCCAGCTGTAG 2118 0.4542 MELQGRSDQCLPERKGQKRKLEDEFDDQRQISAPPTGDAREALLSDVKDQVSILNSSFSWKEADRAAAKRATHALADLAKNEEVVNVIVEGGAIPALVQHLQAPLEEDDLVQRPLPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALKLLVDLLKRHKNGLTSRAINSLIRRAADAITNLAHENSSIKTRVRMEGGIPPLVHLLEFADTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDTHNQAGIAHNGGLIPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGIQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVSDKAFQRRVALALAHLCLADDQKKIFIDHHGLELLIGLLSSSSPKQQLEGAVALFKVANKAMTLSPVDAAPPSPTPQVYLGEQYVNNSTLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFEMMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFNAISLRHTCILFILEQFDKLSARPGHTHLIQRITPEIRNYFVKALTKANSHIQL* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1208 705 Gene3D - 168 268 IPR011989 -
Aev05g1208 705 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 8 701 - -
Aev05g1208 705 Gene3D Potassium Channel Kv1.1; Chain A 520 665 IPR011333 -
Aev05g1208 705 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 92 147 IPR000225 GO:0005515
Aev05g1208 705 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 146 196 IPR000225 GO:0005515
Aev05g1208 705 MobiDBLite consensus disorder prediction 1 38 - -
Aev05g1208 705 ProSiteProfiles BTB domain profile. 539 606 IPR000210 GO:0005515
Aev05g1208 705 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 363 405 IPR000225 GO:0005515
Aev05g1208 705 SUPERFAMILY POZ domain 530 633 IPR011333 -
Aev05g1208 705 Gene3D - 42 167 IPR011989 -
Aev05g1208 705 SMART BTB_4 539 636 IPR000210 GO:0005515
Aev05g1208 705 Pfam Armadillo/beta-catenin-like repeat 311 350 IPR000225 GO:0005515
Aev05g1208 705 Pfam Armadillo/beta-catenin-like repeat 227 266 IPR000225 GO:0005515
Aev05g1208 705 Pfam Armadillo/beta-catenin-like repeat 192 224 IPR000225 GO:0005515
Aev05g1208 705 SUPERFAMILY ARM repeat 62 411 IPR016024 -
Aev05g1208 705 Gene3D - 269 429 IPR011989 -
Aev05g1208 705 Pfam BTB/POZ domain 532 634 IPR000210 GO:0005515
Aev05g1208 705 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 238 280 IPR000225 GO:0005515
Aev05g1208 705 SUPERFAMILY ARM repeat 437 508 IPR016024 -
Aev05g1208 705 SMART arm_5 135 183 IPR000225 GO:0005515
Aev05g1208 705 SMART arm_5 81 134 IPR000225 GO:0005515
Aev05g1208 705 SMART arm_5 269 309 IPR000225 GO:0005515
Aev05g1208 705 SMART arm_5 467 507 IPR000225 GO:0005515
Aev05g1208 705 SMART arm_5 352 392 IPR000225 GO:0005515
Aev05g1208 705 SMART arm_5 185 225 IPR000225 GO:0005515
Aev05g1208 705 SMART arm_5 311 351 IPR000225 GO:0005515
Aev05g1208 705 SMART arm_5 227 267 IPR000225 GO:0005515
Aev05g1208 705 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 196 231 IPR000225 GO:0005515
Aev05g1208 705 CDD BTB_POZ_ARIA_plant 526 641 - -
Aev05g1208 705 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 8 701 IPR044282 -
Aev05g1208 705 Gene3D - 430 513 IPR011989 -
Aev05g1208 705 MobiDBLite consensus disorder prediction 1 29 - -
Aev05g1208 705 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 322 364 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1208 Aev-Chr5 8450998 8456326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1208 295 409 U-box Gene Family AT3G46510 30.769 2.02e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aev05g1208 BTB 3.5e-26 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1208 - - gmx:100819832 1231.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1208 05 8450998 8456326 Aev09g2394 09 26074187 26079832 PCT