Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1203 ATGATGCTGTCCAATCATCTACAAAACGGCATCGAAACGGCGAGGCTTGTTTGGTCGCGGATTCCGAACTCGGAAGAATCACAGTACCTAGACGACGCCTTTGGCATCTTGAAGAAGGGCGATGGAAGCGGCGCTGAGAGCCTTGACTATGAAGTCATAGAGAATTTTGCTTATCGGGAAGAACAGGCGCAGAGAGGGAAGCTGTATGTGAGTTACTTGCTGGTGGTGAAATGGTTCTTTGCCTTGCTCATTGGCATCGGCACTGGACTTGCTGCTGTTTTCATCAATCTTTCTGTTGAAAATTTTGCTGGCTGGAAGTTCTCGTTGACGTTTAATATAATTCAGAAGTCATATGTTGCTGGTTTTGTTGTATATGTTCTGATCAACTTGGCTTTGGTGTTCTCCTCTGTATATATTATCACACAATTCGCACCAGCAGCTGCTGGATCTGGTATTCCTGAAATCAAGGGTTACTTAAATGGGGTTGATATTCATGGGATCCTTCTTCTGAGAACTTTGATTGGAAAGATATTTGGCAGCATTGGTTCAGTGGGAGGAGGACTTGCTTTGGGTAAAGAAGGTCCTCTTGTCCATACTGGTGCTTGTATTGCTTCTTTACTTGGACAAGGTGGATCCACTAAGTATCATCTAAATTCAAGGTGGTTTCAAGTATTCAGAAGTGATCGGGATCGCCGAGATCTTGTAACCTGTGGGTGTGCAGCTGGAGTTGCTGCTGCATTTAGAGCTCCTGTTGGTGGTGTATTGTTTGCATTAGAAGAGGTTACATCTTGGTGGAGGAGTCAACTCATGTGGCGTGTCTTCTTCACTTCTGCTATTGTGGCTGTTGTAGTGCGAACTGCTATGGGGTGGTGTAAAAATGGAAACTGTGGACATTTTGGGTCTGGTGGATTCATAATATGGGATACATCAGATGGCCAAGAGGATTATTCCTTTGCAGAGCTATTACCAATGGCTATTATTGGAGTTATTGGAGGTCTTCTAGGAGCTTTATTTAACCAGCTTACACTTTATATTACAACTTGGCGTCGAAACCATCTTCACAAAAAAGGGAGCCGAGTCAAGATTATTGAAGCATGCTTAGTCTCCCTTTTAACTTCTGTTATTTCATTTGGCTTGCCGCTCCTAAGACAATGTAGTCCATGCCCTGAATCTGATCCTTCTTCTGGTATTGAATGCCCACGACCTCCTGGAATGTATGGGAATTATGTAAATTTCTTCTGTAGCAAAGACAAGGAATACAATGATCTTGCAACTATTTTCTTCAACACACAGGATGATGCCATAAGGAATTTATTCAGTGCAAAAACAATACATGAGTACAGTTCTCAAAGTTTATTAACCTTTTTGGTTATGTTTTATGCTTTAGCAGTGGTGACGTTTGGTACTGCTGTGCCAGCTGGTCAATTTGTTCCTGGTATAATGATAGGATCGACATATGGACGTCTTGTTGGCATGTTTGTTGTAAAATATTACAGAAAGCTCAACATTGAAGAGGGAACGTATGCTTTACTGGGAGCTGCATCTTTTCTTGGAGGTTCAATGCGGATGACAGTGTCTCTCTGTGTCATCATGGTTGAAATAACAAATAACTTGAAGTTATTACCCCTTATTATGCTTGTTCTTCTTATATCAAAGGCTGTTGGTGATGCGTTTAATGAGGGCCTCTATGAAGAACAGGCAAGATTGAGGGGCATTCCATTACTGGAATCAAGGCCTAAATATGAGATGCGGAACATGACAGCAAAGGAGGCCTGCGGGAGTGGAAGGGTGATTTCCTTACCTCGCGTTGTTAAGGTTTCAGATGTAGTTTCTATTCTACGGAGCAACAAACACAATGGTTTTCCAGTGATTGATCACACAAGAAGTGGAGAGTCACTTGTCATTGGATTAGTGCTTCGGAGTCATTTGCTGGTAATTCTTCAGTCAAAGGTTGATTTCCAGCATAGCCCTTTACCCTCTGATCCCAGAGGTGGTGACAGGTCAATAAGGCATGATTCTGGTGAATTTGCAAAGCCTGTTTCTAGTAAGGGAATATGCATTGATGATATACATTTAAGTTCAGATGACTTGGAAATGTACATAGATCTTGCCCCATTTTTGAATCCATCACCATATATTGTACCTGAAGATATGTCTTTGACCAAGGTGTACAATCTTTTCCGCCAACTTGGTTTGAGGCATCTATTTGTCGTTCCTCGTCCATCACGTGTACTTGGTTTAATAACCAGAAAAGATTTGTTGATTGAGGACACAGAAAATGTAAATATATTAGAGCTTCAGTCAACTAGTGTAAGGATTCAGCATCGCAATAATACAACATTGACTAGGAGGAGGAATTCCGACATCGATCGCCCTCTGCTAAATGGTCTTCTGGTTCAGAATCAGATATTCGCAGATTAG 2421 0.4184 MMLSNHLQNGIETARLVWSRIPNSEESQYLDDAFGILKKGDGSGAESLDYEVIENFAYREEQAQRGKLYVSYLLVVKWFFALLIGIGTGLAAVFINLSVENFAGWKFSLTFNIIQKSYVAGFVVYVLINLALVFSSVYIITQFAPAAAGSGIPEIKGYLNGVDIHGILLLRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLNSRWFQVFRSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKNGNCGHFGSGGFIIWDTSDGQEDYSFAELLPMAIIGVIGGLLGALFNQLTLYITTWRRNHLHKKGSRVKIIEACLVSLLTSVISFGLPLLRQCSPCPESDPSSGIECPRPPGMYGNYVNFFCSKDKEYNDLATIFFNTQDDAIRNLFSAKTIHEYSSQSLLTFLVMFYALAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLISKAVGDAFNEGLYEEQARLRGIPLLESRPKYEMRNMTAKEACGSGRVISLPRVVKVSDVVSILRSNKHNGFPVIDHTRSGESLVIGLVLRSHLLVILQSKVDFQHSPLPSDPRGGDRSIRHDSGEFAKPVSSKGICIDDIHLSSDDLEMYIDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPRPSRVLGLITRKDLLIEDTENVNILELQSTSVRIQHRNNTTLTRRRNSDIDRPLLNGLLVQNQIFAD* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1203 806 PRINTS Chloride channel signature 240 259 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g1203 806 PRINTS Chloride channel signature 506 522 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g1203 806 PRINTS Chloride channel signature 145 162 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g1203 806 PRINTS Chloride channel signature 524 543 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g1203 806 PRINTS Chloride channel signature 176 195 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g1203 806 PRINTS Chloride channel signature 471 491 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g1203 806 PRINTS Chloride channel signature 562 576 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g1203 806 PRINTS Plant CLC chloride channel signature 261 269 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev05g1203 806 PRINTS Plant CLC chloride channel signature 423 439 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev05g1203 806 PRINTS Plant CLC chloride channel signature 51 59 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev05g1203 806 PRINTS Plant CLC chloride channel signature 275 285 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev05g1203 806 PRINTS Plant CLC chloride channel signature 293 300 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev05g1203 806 MobiDBLite consensus disorder prediction 657 676 - -
Aev05g1203 806 PANTHER CHLORIDE CHANNEL PROTEIN CLC-D 5 796 - -
Aev05g1203 806 ProSiteProfiles CBS domain profile. 707 766 IPR000644 -
Aev05g1203 806 Gene3D - 595 760 IPR046342 -
Aev05g1203 806 ProSiteProfiles CBS domain profile. 586 653 IPR000644 -
Aev05g1203 806 CDD CBS_pair_voltage-gated_CLC_euk_bac 597 754 - -
Aev05g1203 806 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 5 796 - -
Aev05g1203 806 Pfam CBS domain 708 754 IPR000644 -
Aev05g1203 806 Pfam CBS domain 599 647 IPR000644 -
Aev05g1203 806 SUPERFAMILY CBS-domain pair 580 754 IPR046342 -
Aev05g1203 806 CDD ClC_6_like 46 575 - -
Aev05g1203 806 SUPERFAMILY Clc chloride channel 55 577 IPR014743 -
Aev05g1203 806 Gene3D Clc chloride channel 70 576 - -
Aev05g1203 806 SMART cbs_1 710 758 IPR000644 -
Aev05g1203 806 SMART cbs_1 596 648 IPR000644 -
Aev05g1203 806 Pfam Voltage gated chloride channel 133 555 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1203 Aev-Chr5 8409756 8417610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1203 2 772 Ion Channels AT5G26240 84.715 0.0 1268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1203 K05016 - gmx:100811908 1459.89