Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1194 ATGGAGCCGGGAATGAGATCAGTTGGGCCTTCTGGGGTTCTTGTTAAGAACAGGAACTCCTCGGGTTGTTTGATTGTTCGCAAGAAAGGGGAAGGAGTTGGTTCTTCTTCTGCTTCTCGGAATCTCTTTGAATCAAACAGACCCACCAAAAGGCCCATCGTCCCTTCAAGTGATTCCGAATCAAGCGACGATGAATTACTAATGCATTCGGGTAGAAGGCTTGGCCCTGAGACTATTCGAGCCTGTAATGGCTTGACTGCCTTTGAGCGTGGTATGGCTGGAGGAGGTGAACATGGTAGGAAGAGGGACAGAGTGGAACAAATTAGGGGTAATGGGGATGGTCTCATTGTGGAGAACAGTTTCGACAGCAGGGAAAGGAAGCGTGGGAAGGTGGATCTGTATAATCTCAATGAATATGATGGCATGGAGGTAGAAAAGGTGAGGAGGAGGCATGCTGATGATAATGGGGTTGGGTTTGGAGGAGGAAGGTTCATGGGTTCAGTGCATGCAGCTAGAGTTGGCATTGACAGGGAATTTGAAACAGGGTCAAGCAGACACATTCCTGATAAGAGGAAGAACTCCTATTGTGACAGGCAAAGTGGCTTGTATCCGGGTGATAATGTTGACCATGATAGGTTCAAGCCAAACAGGGATGGAGCTCAGCTGCCTCTACCATTGTTGAGGGAGAAGCTTTGTTCGGATGGAACCATTAGGGTTCAGGGGAAAAATGGTGTCTTGAAGGTAATGGTTAATAAGAAGAAGGTGGTTGGGCCATTAGAACACTATGGTCATCGCAACCCTCTGGAAAGCAGGCAAAGATTGAGCTCTGAGGGGACTGCCAAAAGGAATGTTCTGATTCAGCAGCCTTTGCCCTTCCTGGAAACAAAACCAGCCGAGAAACCAGGTTTACCTGTTAGGCCAGAGAAGAAACCAATATCATCGAAAAAATCATTGTCAAGCAAGGATAGTAAGGGTGATGAGTGGGATTCAGATAAGAGTGACACATCACTCAATCCAGGAATTAGAAATACTGAAGCTCGCAAGTCTGAGAAGCTGAAAATTTCTGAGGATGAACAGACTCCCATGCATGAAAAGCTCCCAACTACAAAGGTGAAAGAAGGAAAAATCAAGCGGGGTAGCGGCACAGAAAAACAGAAGCTCCGAGAACGAATAAGGGAGATGCTTCTGAATTCAGGTTGGACCATAGACTATCGGCCACGAAGGAACAGAGACTATCTAGATGCAGTTTACATCAATCCAACTGGTACAGCTTATTGGTCTATCATTAAGGCGTATGATGCACTTCAGAAGCAATTGAATATTGATGTCAATGAGGCCAAGCCCAAAGGGGACAGTTCTTCCTTTGCTCCAATCGCAGATGATGTGCTCAGTCAATTGACAAGGAAAACTAGGAAGAAGATGGAGAAAGAATTGAAGAATAAGAAGAATAAAAGATATGACAGTGAGAGTGATAGTGTAAAAGAGCCTCACATTGGACGATCTGCCAACAACAAGCTTGATATGAATATTGCAGATAGTGATAGCAATGAAGATAAATTAAGCACCTTTATAAAGCAGGGAAGTAAGCCAACAAAAAATAAAATTATTGAAAGTACCACTCTGAGTGCTGGCTCTAAAATCCAGAACACAACACATCACTCAAATGATGGAGTAGAAAAATCATTATCTGGATGTGACCCCCATCTTCTACATGGAAGAAAGAGTAGAAAGCAAGGAAGATGTACCTTATTAGTTCGAAGTTCTAACAACGGATTAAATTCAGAATCTGATGGCTTTGTGCCATATACGGGCAAACGTACAGTGCTTTCCTGGTTGATTGACTCTGGGACAGTACAGTTAAGTCAAAAGGTTCAGTATCGTAGACGGAAAAGAGTACTGCTGGAGGGATGGATTACAAGAGATGGCATTCATTGTGGCTGCTGTAGTAAGATCCTCACAGTTTCAAAGTTTGAGCTTCATGCCGGAAGCAAATTGCCACAGCCATATCAGAACATATATTTGGAGTCTGGGATTTCTCTACTGCAATGTCAGATAGATGCATGGAATGCACAAGAGAATTCTGAGAAAATTCCTTTCCATGCTGTGGATATTGATGGTGATGATCCAAATGATGATACTTGTGGTATATGTGGAGATGGAGGTGACTTAATTTGTTGTGATGGTTGTCCATCGACATTTCATCAGAGCTGCTTGGGTATACAGATGCTTCCTCCTGGTGAATGGCACTGTCCGAATTGCACCTGTAAAATTTGTGGCATAGCAAGTGAAACTTTTAAAAAAGACGGTGCAACTATGAATACCCTACGGACCTGCAACTTGTGTGAGAAAAAATATCATTACTTGTGCTCTGAGGAGAAAGATGGCCTTCCTAACTCTAATATGTCAGACCCTTCTTTTTGTGGGAAAGAGTGCAAAGAGCATTTTGAACACTTGAAGAAGTACCTTGGTGCCAAGCATGAACTAGAGGCGGGCTTTTCTTGGTCTCTTATTCATAGAACTGATGAAGACTCAGAGACAGCTGGTAGGGGAATGACCCACAGGGTGGAATGCAATTCCAAGCTAGCTATTGCTCTGACTGTGATGGAGGAATGCTTTTTACCAGTTGTTGATCAGCGGAGCGGGATAAATATGATCCAAAATGTTCTATATAATAGTGGGTCAAATTTCAGTCGGTTGAATTACAGTGGCTTTTACACTGCTATTTTGGAGCGGGGGGATGAAATCATTTCTGCGGCATCCATTAGGTTTCGTGGGACTAAATTAGCTGAGATGCCATTCATTGGAACTCGCCATATATATAGGCGCCAGGGGATGTGCCGCCGGCTTTTTTCTGCCATCGAATTGGCTCTTTGTTCTCTGAAGGTTGAGAAACTGGTAATTCCTGCAATTGCTGAACTCCAGCATACATGGAAAGAAGTTTTTGGCTTCACAAATCTTGAGGAACCACTTAGAAAAGAAATAAGGTCATTGAACATGCTGGTTTTCCCGGGTATAGATCTGTTACAGAAGCTGTTAGCAGAGCGAGGCAAACACGAGGGCAATACATCTGCTGCAGGTTCTGAGAAGCAGGGAAATGGAGACATGGATTTTCTTATGTCAAAAATGGCAAATAGGTCAGATATGGATGCCTCACCTCTGCAGGATCCTCTCAGAAGTGATGATGCTAGTTCAGATTCTGGCAGTGAGACTAATGATGAACTTAGTGATGCTTCTGAAGAACTATACGATCAAGTTTCGGTCCACAAAACCATTTCTAGCAAATATCATTCCGAGGAAAGGTTATCTGATTCAGCTTCAGATAAATGTGTTTCTCCTTCTAGTACTAGTCATGGTCGACTGGAGATGAAAAATGAAATAGTGATGTCTCCTGCTGTAGATGATAAATTGCATCCTTCTACCAAATGCCAATTCATTTCACAAAAAGACTCTGCTGTTCCTGATTCCCCAAAGATTCCAGCTTTGGTTCAGGAAACTGCTTTTTCTGACCCTGGTTCAGCAGAAAACAGAGACAAGAAATGTCACTCATTCACTGCTATGAATTTTGATTCATCGAAGCTTGACATTAATACAGTGTTGGATTCAGACCTGGCAAATAATATTTCTTCTAACGAGGTTCATATGAATGATGCTCATGCGGTTGATGAAGCTGTTCCATCGGGTAATTTATCTGAAGAGAACATTAGCAAGGAGAATGGTGAAGATGCAGAAGTTGTTGGTTCTGTTCACAATCAGGCTGATGAGAGTTTCTTGCATGCAAGATCTGATTGCAGTGGCAAAATTGCACATGAGGAGGAAAGAAAGTTGCATTTGAACAGAGAAGTTGCTTCAAAAGAAATGTATTATAATGAAAGTGGCATAAATGCTTCGGGTGAAAGTTCCGAGACTGATCCGGTCTAG 3918 0.4283 MEPGMRSVGPSGVLVKNRNSSGCLIVRKKGEGVGSSSASRNLFESNRPTKRPIVPSSDSESSDDELLMHSGRRLGPETIRACNGLTAFERGMAGGGEHGRKRDRVEQIRGNGDGLIVENSFDSRERKRGKVDLYNLNEYDGMEVEKVRRRHADDNGVGFGGGRFMGSVHAARVGIDREFETGSSRHIPDKRKNSYCDRQSGLYPGDNVDHDRFKPNRDGAQLPLPLLREKLCSDGTIRVQGKNGVLKVMVNKKKVVGPLEHYGHRNPLESRQRLSSEGTAKRNVLIQQPLPFLETKPAEKPGLPVRPEKKPISSKKSLSSKDSKGDEWDSDKSDTSLNPGIRNTEARKSEKLKISEDEQTPMHEKLPTTKVKEGKIKRGSGTEKQKLRERIREMLLNSGWTIDYRPRRNRDYLDAVYINPTGTAYWSIIKAYDALQKQLNIDVNEAKPKGDSSSFAPIADDVLSQLTRKTRKKMEKELKNKKNKRYDSESDSVKEPHIGRSANNKLDMNIADSDSNEDKLSTFIKQGSKPTKNKIIESTTLSAGSKIQNTTHHSNDGVEKSLSGCDPHLLHGRKSRKQGRCTLLVRSSNNGLNSESDGFVPYTGKRTVLSWLIDSGTVQLSQKVQYRRRKRVLLEGWITRDGIHCGCCSKILTVSKFELHAGSKLPQPYQNIYLESGISLLQCQIDAWNAQENSEKIPFHAVDIDGDDPNDDTCGICGDGGDLICCDGCPSTFHQSCLGIQMLPPGEWHCPNCTCKICGIASETFKKDGATMNTLRTCNLCEKKYHYLCSEEKDGLPNSNMSDPSFCGKECKEHFEHLKKYLGAKHELEAGFSWSLIHRTDEDSETAGRGMTHRVECNSKLAIALTVMEECFLPVVDQRSGINMIQNVLYNSGSNFSRLNYSGFYTAILERGDEIISAASIRFRGTKLAEMPFIGTRHIYRRQGMCRRLFSAIELALCSLKVEKLVIPAIAELQHTWKEVFGFTNLEEPLRKEIRSLNMLVFPGIDLLQKLLAERGKHEGNTSAAGSEKQGNGDMDFLMSKMANRSDMDASPLQDPLRSDDASSDSGSETNDELSDASEELYDQVSVHKTISSKYHSEERLSDSASDKCVSPSSTSHGRLEMKNEIVMSPAVDDKLHPSTKCQFISQKDSAVPDSPKIPALVQETAFSDPGSAENRDKKCHSFTAMNFDSSKLDINTVLDSDLANNISSNEVHMNDAHAVDEAVPSGNLSEENISKENGEDAEVVGSVHNQADESFLHARSDCSGKIAHEEERKLHLNREVASKEMYYNESGINASGESSETDPV* 1306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1194 1305 SMART PHD_3 713 754 IPR001965 -
Aev05g1194 1305 SMART PHD_3 755 812 IPR001965 -
Aev05g1194 1305 MobiDBLite consensus disorder prediction 1 20 - -
Aev05g1194 1305 MobiDBLite consensus disorder prediction 34 61 - -
Aev05g1194 1305 SUPERFAMILY FYVE/PHD zinc finger 703 759 IPR011011 -
Aev05g1194 1305 CDD PHD2_CHD_II 714 753 - -
Aev05g1194 1305 ProSiteProfiles Zinc finger PHD-type profile. 711 756 IPR019787 -
Aev05g1194 1305 MobiDBLite consensus disorder prediction 286 361 - -
Aev05g1194 1305 MobiDBLite consensus disorder prediction 344 361 - -
Aev05g1194 1305 ProSitePatterns Zinc finger PHD-type signature. 714 753 IPR019786 -
Aev05g1194 1305 MobiDBLite consensus disorder prediction 1093 1123 - -
Aev05g1194 1305 MobiDBLite consensus disorder prediction 26 66 - -
Aev05g1194 1305 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER PROTEIN 1 1263 - -
Aev05g1194 1305 MobiDBLite consensus disorder prediction 1106 1120 - -
Aev05g1194 1305 Pfam PHD-finger 714 756 IPR019787 -
Aev05g1194 1305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 703 774 IPR013083 -
Aev05g1194 1305 Pfam Tify domain binding domain 636 686 IPR032308 -
Aev05g1194 1305 Coils Coil 464 491 - -
Aev05g1194 1305 MobiDBLite consensus disorder prediction 470 512 - -
Aev05g1194 1305 MobiDBLite consensus disorder prediction 1047 1078 - -
Aev05g1194 1305 MobiDBLite consensus disorder prediction 301 333 - -
Aev05g1194 1305 MobiDBLite consensus disorder prediction 480 501 - -
Aev05g1194 1305 MobiDBLite consensus disorder prediction 260 279 - -
Aev05g1194 1305 PANTHER PHD FINGER FAMILY PROTEIN 1 1263 - -
Aev05g1194 1305 MobiDBLite consensus disorder prediction 1057 1071 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1194 Aev-Chr5 8332010 8338252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1194 1 1015 PHD Transcription Factor Family AT4G14920 50.627 0.0 905
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev05g1194 TDBD 5.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1194 - - gmx:102666194 1717.21