Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1179 ATGGCAGTAGGGAAGAACAAGCGAATTTCCAAGGGGAAGAAGGGTGGCAAGAAGAAGGCCGCCGATCCCTTTGCCAAGAAGGATTGGTACGATATCAAGGCCCCATCCGTCTTCCAAGTTAAGAATGTCGGCAAAACCCTCGTCACTCGTACTCAGGGTACAAAGATTGCTTCGGAAGGACTCAAACATAGAGTGTTTGAGATCTCCCTGGCTGATCTTCAAGGTGATGAGGACCATGCCTTCAGGAAGATTCGTTTGAGAGCTGAGGATGTTCAAGGGAGAAATGTTCTCACAAATTTCTGGGGAATGGATTTTACAACTGATAAGTTGAGGTCCTTGGTGCGCAAATGGCAAACTTTGATTGAGGCTCATGTCGATGTGAAGACCACTGATAATTATACTCTAAGGATGTTCTGCATTGGGTTTACCAAGAGACGTGTTAACCAGATGAAGAGGACATGCTATGCTCAATCCAGTCAGATTCGACAGATTCGCAGGAAGATGAGGGAGATCATGACCAACCAGGCAACATCCTGTGATCTGAAGGAGTTAGTCCGCAAATTCATCCCTGAGATGATCGGAAAGGAGATTGAGAAGGCAACATCTAGCATCTACCCCCTACAGAATGTGTTCATCCGTAAAGTTAAGATCCTCAAAGCTCCCAAATTTGATCTTGGGAAACTGATGGAGGTTCATGGTGATTACTCAGAAGATGTTGGTACAAAGGTGGACAGACCTACAGATGAAACCATGGCTGAGCCAGCAGTGACCGAAGTCGTAGGAGCTTGA 789 0.4613 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQGDEDHAFRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRVNQMKRTCYAQSSQIRQIRRKMREIMTNQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKVDRPTDETMAEPAVTEVVGA* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1179 262 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 260 - -
Aev05g1179 262 MobiDBLite consensus disorder prediction 1 20 - -
Aev05g1179 262 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 260 - -
Aev05g1179 262 MobiDBLite consensus disorder prediction 1 15 - -
Aev05g1179 262 SMART Ribosomal_S3Ae_2 15 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
Aev05g1179 262 ProSitePatterns Ribosomal protein S3Ae signature. 61 73 IPR018281 GO:0003735|GO:0005840|GO:0006412
Aev05g1179 262 Hamap 40S ribosomal protein S1 [RPS3A]. 1 259 IPR027500 GO:0003735|GO:0005840|GO:0006412
Aev05g1179 262 Pfam Ribosomal S3Ae family 16 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1179 Aev-Chr5 8262367 8264252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1179 1 262 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 84.791 7.08e-161 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1179 K02984 - gmx:100805519 460.685