Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1175 ATGGATTTGGGAGGTGAGGGTGCTAAGTCACAAAAGATGGATTTGGAAGCAGTAGGAGCTCTGAATCAGAAGATGAAGGGTGCTGGAAACCAAAGCAGCAAAGATATGATTTTCAGAGCCGATAAAATTGATCTCAAGAGCTTAGATGCCCAGCTGGAAAAGCACTTGAGCAAGGTTTGGTCGAGAACGGTGAGCATGGAGGTTAAAAGGCCTAAAGAAGAGTGGGAGATTGATTTGGCCAAATTGGATTTGCGATATGTTGTAGCTCATGGGGCTTATGGTACTGTGTACCGGGGCACATATGATACTCAAGATGTTGCAGTGAAAGTGTTGGACTGGGGTGAGGATGGTGTCGCCACTGCCGCAGAAACTGCCGCTTTACGGGCATCATTTAGGCAGGAGGTTGCCGTCTGGCACAAACTTGACCATCCAAATGTCACCAAATTTGTTGGAGCTTCGATGGGCACTTCAAATCTTAAGATTCCCTCAAAAAATCCATCAAGTGCTGAACAAGATTCTCATCCTTCTAGGGCATGTTGTGTTATTGTTGAGTTTCTGCCTGGTGGGACACTAAAACAGTACTTGATTAAAAATAGGCGGAAGAAACTTCCTTACAAGGTTGTGATTCAGCTGGCTTTAGACCTTGCAAGGGGTCTTAGCTATTTACATTCAAGAAGGATTGTTCACCGGGACGTCAAAACAGAGAATATGTTACTCGATTCTAAACGAAATCTGAAAATAGCCGATTTTGGGGTTGCTAGGGTTGAAGCTTTGAATCCATGTGAGATGACTGGTGAAACTGGAACACTTGGATATATGGCACCTGAGGTTCTGGATGGTAAACCTTACAACAGGAGATGTGATGTCTATAGCTTCGGCATTTGCTTGTGGGAAATTTATTGCTGTGATATGCCTTACCCAGATCTAAGCTTTGCCGATGTATCATCTGCGGTTGTTCGTCAGAATCTACGACCTGATATTCCGAGGTGTTGTCCAAGTGCTTTTGTAAATATCATGAAGAAATGCTGGGATGCGAATCCAAACAGGCGTCCTGAGATGGCTGCGGTGGTCAGAATGCTGGAGGCGATCGATACGAGCAAAGGCGGCGGAATGATACCAGAAGATCAGAATGCTTCTTGCTTCTGTTTTGCCCCGACCCGCGGTCCTTAA 1170 0.453 MDLGGEGAKSQKMDLEAVGALNQKMKGAGNQSSKDMIFRADKIDLKSLDAQLEKHLSKVWSRTVSMEVKRPKEEWEIDLAKLDLRYVVAHGAYGTVYRGTYDTQDVAVKVLDWGEDGVATAAETAALRASFRQEVAVWHKLDHPNVTKFVGASMGTSNLKIPSKNPSSAEQDSHPSRACCVIVEFLPGGTLKQYLIKNRRKKLPYKVVIQLALDLARGLSYLHSRRIVHRDVKTENMLLDSKRNLKIADFGVARVEALNPCEMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPDIPRCCPSAFVNIMKKCWDANPNRRPEMAAVVRMLEAIDTSKGGGMIPEDQNASCFCFAPTRGP* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1175 389 SMART serkin_6 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g1175 389 SUPERFAMILY Protein kinase-like (PK-like) 61 360 IPR011009 -
Aev05g1175 389 ProSiteProfiles Protein kinase domain profile. 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g1175 389 Gene3D Transferase(Phosphotransferase) domain 1 186 377 - -
Aev05g1175 389 CDD STKc_MAP3K-like 88 360 - -
Aev05g1175 389 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 19 382 - -
Aev05g1175 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Aev05g1175 389 Pfam Protein tyrosine and serine/threonine kinase 85 360 IPR001245 GO:0004672|GO:0006468
Aev05g1175 389 PRINTS Tyrosine kinase catalytic domain signature 221 239 IPR001245 GO:0004672|GO:0006468
Aev05g1175 389 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Aev05g1175 389 PRINTS Tyrosine kinase catalytic domain signature 183 196 IPR001245 GO:0004672|GO:0006468
Aev05g1175 389 PRINTS Tyrosine kinase catalytic domain signature 331 353 IPR001245 GO:0004672|GO:0006468
Aev05g1175 389 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 19 382 - -
Aev05g1175 389 Gene3D Phosphorylase Kinase; domain 1 71 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1175 Aev-Chr5 8220290 8222941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1175 22 389 MAP Kinase Kinase Kinase AT3G22750 79.133 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aev05g1175 PK_Tyr_Ser-Thr 1.2e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1175 - - gmx:100803917 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1175 05 8220290 8222941 Aev05g1175 05 8220290 8222941 ECH
Aev09g2334 09 25697840 25700580 Aev05g1175 05 8220290 8222941 PCT