Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1163 ATGTTCTCTTTCCAAAGCAGTTTCCCCTCTTCCAATCAATCTTCTTCTTGTTACCCTTCTCTTCCATTTTATATTGATCCTGAAAATGGTTTTGCTGGAATTAGCAGCAGCAACAACAACACTAGTATCCTTCATGATGGTGGTGGTGGTGTTCCTGTTCCCTGTTTCATGCCAATCATAAGTACTCATCATCAAACAGTAGCAGCTCCAATAATAATCCCAAGTGCTGCAGAAACTGGTGTGACCAATAACAACAACAACAACAATAATAATAATAATCTGATGAACTATTATGGTTTTGGTTCTTCTTCCATGAGGAATGGTGTGACAAAGAAGGCAGGAGGAGGAGGAACAAAGAAAGATAGGCACAGCAAGATATTCACATCTCAGGGGCTGAGGGACAGAAGGGTGAGGCTATCAAGTGAAATAGCAAGAAAGTTCTTTGATCTGCAGGACATGCTTGAGTATGACAAGCCCAGCAACACTCTTGAGTGGCTCTTCACTAAGTCTGACAATGCCATCAAAGAGCTTGCAAGGACTAAGCACCACAACATCATGAGTGATGAGGAGAGGAAGTTGCTGAAGGAGTCATCATCATCAAGAGGTAGAGCAAGATCAGTAGTAAGGACTAATACTTCTTCTTCCAAGATCTGCAGGAGCAATAATAAAAATGTGAATAATGCTGCAGCAGCAGATCCTCAGATTCTGCAGCACCAATTGAAGACTGTTATGCCACCCAATTTTGTTCATCATTATCCTCACCACCATCTTTTTGTAGCAGAAGCAGCAAGAGATGATGATGATGATGGATTATTATTATTTGAAGAAGAATCTGGTGGTGGTGTGTTAAGGAGGGAATTTTTCAAGCCCTCCTCTAATTTGATGTCGTCTTCACACCTTCATGAGGTTGGGATCCCTAATAATAGTAGGAAGGGGATTATTAGTTTCAACAACAACAACAATGAATACCATCATCATCATGATCATCACTCAATCAGCTCATTATGCCCCAATTCGCGTCCGAATTGGGATGATGATCATACACTCTCTACAGGTATATGTTTCATCAACAAGTAA 1077 0.4076 MFSFQSSFPSSNQSSSCYPSLPFYIDPENGFAGISSSNNNTSILHDGGGGVPVPCFMPIISTHHQTVAAPIIIPSAAETGVTNNNNNNNNNNNLMNYYGFGSSSMRNGVTKKAGGGGTKKDRHSKIFTSQGLRDRRVRLSSEIARKFFDLQDMLEYDKPSNTLEWLFTKSDNAIKELARTKHHNIMSDEERKLLKESSSSRGRARSVVRTNTSSSKICRSNNKNVNNAAAADPQILQHQLKTVMPPNFVHHYPHHHLFVAEAARDDDDDGLLLFEEESGGGVLRREFFKPSSNLMSSSHLHEVGIPNNSRKGIISFNNNNNEYHHHHDHHSISSLCPNSRPNWDDDHTLSTGICFINK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1163 358 Pfam TCP family transcription factor 118 225 IPR017887 -
Aev05g1163 358 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 74 217 IPR005333 GO:0003700
Aev05g1163 358 PANTHER TRANSCRIPTION FACTOR TCP12 74 217 - -
Aev05g1163 358 ProSiteProfiles TCP domain profile. 119 177 IPR017887 -
Aev05g1163 358 MobiDBLite consensus disorder prediction 188 225 - -
Aev05g1163 358 MobiDBLite consensus disorder prediction 200 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1163 Aev-Chr5 8154412 8155488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1163 92 184 TCP Transcription Factor Family AT1G67260 54.839 9.11e-24 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev05g1163 TCP 2.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1163 - - aprc:113871835 149.443