Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1148 ATGATGAATAATAGCAGCAACAGTGTCAGCGGCGGTGGCGGTGGTGGTGGCGGCGGCGGTGGTGGGGCAGGGATGCTGATGGGGATGATGGGTCGGTCACCATTCACAGTTTCTCAGTGGCAGGAGCTTGAACACCAAGCTCTGATTTACAAGTACATGGTGGCTGGTCTTCCTGTTCCTCCTGATCTTGTCATCCCCATTCAGAAGAGCTTAGACTCCATTTCTCAAACCTTTTTCCACCACCCCACTTTGAGTTATTGTTCCTTCTACGGGAAGAAGGTGGACCCGGAGCCAGGACGATGCAGGAGGACTGATGGGAAAAAGTGGAGGTGCTCCAAGGAAGCATACCCAGACTCCAAGTACTGTGAGCGACACATGCATCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGGCACAGTCATCATCCACTGTGACATCAATGACTGCAGCTAGTGGCAGCAGTGGAACTGTAAATTACCAAGACCTTACCACAAATGCCTTTGGTAATAATCCCCAACAAGGTACCGGTACTGGTTCTGCAACCGACCAAACCCACTATCAATTGGATTCCATCCCCTATGGGATTCCAAGTAGAGAATACAGGTATGTTCAAGGACTTAAATCTGAGGGTGGTGAACAAAGTTTCTTTTCCAAAGCTATAGGAAGCAACAAGGATCATCTTCGGATGGAGTCACAGCTGGAGAACGCATTGATGCCGATTGGAGTCGCCTCATTTTCAACATCGAGATCAAATAACAATTCCATGTTGCAGGGTGATTATCTCCAGCATTCGTATCTATCCGGCGAACATGCGTCAGGAGAATCTGTTAAGCATGAGGGTCAGTCTCTTCGGCCTTTCTTTGACGAATGGCCTAGGAGCAGGGAGTCGTGGTCTGGTCTGGAAGATGACAGATCCAACCAGACAGCTTTCTCCACGACTCAGCTCTCGATTTCCATTCCCATGTCGTCGTCCAACTTCTCGACAACTAGCTCGCAATCCTCACATGGCGAGATTTAA 1032 0.4932 MMNNSSNSVSGGGGGGGGGGGGAGMLMGMMGRSPFTVSQWQELEHQALIYKYMVAGLPVPPDLVIPIQKSLDSISQTFFHHPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMAQSSSTVTSMTAASGSSGTVNYQDLTTNAFGNNPQQGTGTGSATDQTHYQLDSIPYGIPSREYRYVQGLKSEGGEQSFFSKAIGSNKDHLRMESQLENALMPIGVASFSTSRSNNNSMLQGDYLQHSYLSGEHASGESVKHEGQSLRPFFDEWPRSRESWSGLEDDRSNQTAFSTTQLSISIPMSSSNFSTTSSQSSHGEI* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1148 343 MobiDBLite consensus disorder prediction 127 157 - -
Aev05g1148 343 SMART QLQ_2 33 69 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aev05g1148 343 ProSiteProfiles QLQ domain profile. 34 69 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aev05g1148 343 MobiDBLite consensus disorder prediction 136 157 - -
Aev05g1148 343 MobiDBLite consensus disorder prediction 301 343 - -
Aev05g1148 343 Pfam WRC 96 138 IPR014977 -
Aev05g1148 343 Pfam QLQ 34 68 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aev05g1148 343 PANTHER GROWTH-REGULATING FACTOR 5 29 335 - -
Aev05g1148 343 MobiDBLite consensus disorder prediction 307 343 - -
Aev05g1148 343 PANTHER - 29 335 IPR031137 GO:0005634|GO:0006351|GO:0032502
Aev05g1148 343 ProSiteProfiles WRC domain profile. 95 139 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1148 Aev-Chr5 8076358 8079749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1148 30 138 GRF Transcription Factor Family AT3G13960 64.602 1.62e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Aev05g1148 WRC 1.8e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1148 05 8076358 8079749 Aev05g1148 05 8076358 8079749 ECH