Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1146 ATGGTCTCCTCCTTCTCCTCCTCCTCTTCTCTTCGAGAGTTATTTGTTATGCACAACTGTTGTCGTATTCTAAAGGGCATTGCGATGCTAGTATTCACAGTGATGGTAGTGATAAATTGCTGGTCTACCGTGCATGATGATCCACATTTGTCCCCTGTAATAATCTTCGGTGTGGGTGGCTTGGTGGCATACTATAACATTGCAATTATGTTTCATAGATCAATGGAAGACAATGATGAAGAAGAAGAAGAGATCAAAGGCTCTCAATGTGATGATGAAGAGGCAATATTGGCAACCACAGGTGAGATGGAATCCCAAAACTGCAGAGAAATTAAAGAGAGCACCATTTATTTGATTGTTATGATTTCCAAAGATGACTCATCGTGCTGTGAATGCCTACTTTTTCTCAAGGGAATGGTGTCATGGGCAGTATTTATGATGACGGTTGCGATATATACTTCTGTGGTATGTGAGGATCCACCTTACTCACGTTGGGCCTTCGTAGTTTTCTTTGTGGGTTTCATGGTGGCAATGTCTTACCTAGCACTTGTAGTGTATAGACGTAAACGAAAGAACAAGGACAAGGACAAGGAGACTAATAAAGGCTCTGAATCTGATCAAGTACAAAATACAGAAGGAGTACCATCATTGCCTATTACTAGTACTACTAGTTCTTCGTTGGACGAGAGGATTAAGATTGCGAGGCTTGCCATGAGAACATTACCGCCAGTGATAAGCTTCTCCGCTGAGGAGGAGCACAAAACAGAGAGTGATAATGATGATGATGATGCTCTTCATTGCTCTGTTTGCATGGAACCTTTCATCATTGGACAGTTGATTCAGCCTTTTGGAGTATGCCATCATCATTTTCACTCCTCCTGCCTCAACTCCTGGTTGCTTGCTGGAACTACTACTTGTCCCCTATGCCATAAAGACCTCGCTACTTACCCTTAA 954 0.4235 MVSSFSSSSSLRELFVMHNCCRILKGIAMLVFTVMVVINCWSTVHDDPHLSPVIIFGVGGLVAYYNIAIMFHRSMEDNDEEEEEIKGSQCDDEEAILATTGEMESQNCREIKESTIYLIVMISKDDSSCCECLLFLKGMVSWAVFMMTVAIYTSVVCEDPPYSRWAFVVFFVGFMVAMSYLALVVYRRKRKNKDKDKETNKGSESDQVQNTEGVPSLPITSTTSSSLDERIKIARLAMRTLPPVISFSAEEEHKTESDNDDDDALHCSVCMEPFIIGQLIQPFGVCHHHFHSSCLNSWLLAGTTTCPLCHKDLATYP* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1146 317 SUPERFAMILY RING/U-box 266 315 - -
Aev05g1146 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 245 315 IPR013083 -
Aev05g1146 317 ProSiteProfiles Zinc finger RING-type profile. 267 310 IPR001841 -
Aev05g1146 317 SMART ring_2 267 309 IPR001841 -
Aev05g1146 317 PANTHER OS06G0666500 PROTEIN 230 313 - -
Aev05g1146 317 MobiDBLite consensus disorder prediction 194 225 - -
Aev05g1146 317 Pfam Ring finger domain 266 309 IPR001841 -
Aev05g1146 317 MobiDBLite consensus disorder prediction 204 225 - -
Aev05g1146 317 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 230 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1146 Aev-Chr5 8070191 8072653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1146 190 309 C3H Transcription Factor Family AT3G55530 30.952 4.37e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1146 - K16281 aprc:113865236 106.686