Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1132 ATGCCAACAAAAATCATGGGAGGTGAAGAAGGTGCAGTTGGGGTGATTAGAGAGAATGAAGAAGAGAACAAGTGGCCACCATGGCTGAAGCCACTTCTCAAAACAAGCTTCTTTGTTCAATGCAAAATCCATGCTGATTCCCACAAAAGTGAATGCAATATGTATTGCTTGGACTGTATGAATGGAGCACTCTGTTCTGCTTGTTTGGCCTCTCACAAAGACCACAGAGCTATTCAGATAAGGAGATCTTCATACCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTCTGGACATAACAGGGGTCCAAACTTACATTATAAACAGTGCAAAGATTGTGTTCCTGAATGAGAGGCCTCAGCCTAGGCCTGGCAAAGGTGTCACCAATACCTGTCAGGTCTGTGAGCGAAGCCTCCTTGATTCCTTCAACTTCTGCTCTCTTGGTTGCAAGATAGCTGGAACCTCCAAGAATTTCAGGAAGAAGAAAATGTTAGCTGATACAACAGATGGGTCTGATGGTGAAGAATCAATGAATGGATTCAGCAATGGAAGTGGCAGGAACAAAATCCAGAGCTTCACACCATCAACACCTCCACCAACAGTGGTCAATTACAGGACTGCTAAGAGGAGGAAGGGAATCCCACATAGAGCTCCAATGGGTGGAGGACTAATTATAGAATACTAA 687 0.4381 MPTKIMGGEEGAVGVIRENEEENKWPPWLKPLLKTSFFVQCKIHADSHKSECNMYCLDCMNGALCSACLASHKDHRAIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFNFCSLGCKIAGTSKNFRKKKMLADTTDGSDGEESMNGFSNGSGRNKIQSFTPSTPPPTVVNYRTAKRRKGIPHRAPMGGGLIIEY* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1132 228 MobiDBLite consensus disorder prediction 172 202 - -
Aev05g1132 228 Pfam PLATZ transcription factor 81 152 IPR006734 -
Aev05g1132 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 223 - -
Aev05g1132 228 MobiDBLite consensus disorder prediction 167 202 - -
Aev05g1132 228 CDD Bbox2 41 80 - -
Aev05g1132 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1132 Aev-Chr5 7933533 7935278 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aev05g1132 PLATZ 3.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1132 - - gmx:100810757 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3650 04 34119321 34121199 Aev05g1132 05 7933533 7935278 ECH
Aev05g1132 05 7933533 7935278 Aev05g1132 05 7933533 7935278 ECH