Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1127 ATGGCTGCTGCATGCATCACCTCTGCTTTTTGTGAGATGATGATGGGGAGCAGAGGAAGTAGTGATGAGAGTAGTGGGGTGAAGAAGGGGCCATGGACACCAGAAGAGGACAAAATACTGGTTGAGTTCATTCAGAGGCATGGCCATGGAAGTTGGAGAGCACTCCCAAAGCTTGCTGGATTGAACAGATGTGGGAAGAGTTGTAGGTTGAGGTGGACCAACTATCTGAGACCTGATATCAAGAGAGGAAAATTCTCTGATGAAGAAGAGCAACTCATCATCAACTTGCATTCTGTTCTTGGCAATAAGTGGGCAGCTATAGCAACTCATTTGCCAGGAAGGACTGATAATGAAATAAAGAATTTCTGGAACACACATTTAAAGAAAAAGCTTCTGCAAATGGGGTTAGACCCTGTGACTCATCAACCAAGAACAGATCACCTAAACCTTCTCACCAATCTCCAACACATTCTTGCTGCTGCCAACATTCTCACCACTCTCACAAACCCTCCTCATGACATCAATTCTCTGAGGCTACAATCAGATGCCACTACTCAATTTGCCAAACTCAACTTAGCTCAGAACATTCTTCAACTCATTAATAACTCTGCCTCATCAAACTTTGATCCTCAACTACTTCTCAATAGTCCTGCTTTTGGATCACAATACTCATCTTCATCTTCAGTGACAGAGGAGGCTCTGTTATGTCAAGTTCTAGGATTGAATATGAATCAATATTCTACCCTCCAAAACATTACTTCTTCTTCTCATCATCATCAAAATCAAGCCAATTTCCTTGAATCCCCTCAAGCCAACAAATTTGATGAACAACTTGGTTCAACAAGTGCTACTCCAACATTAACACCATCAAGCTCACTTCCAAATCTGGTTTCTGCTTCATCACCTGAACACTCACCAGCAGCAAAACAAGAACAAAAGGAGGTACTAAACACTAATAAGGAATATTGCTCTAATGTTAATAATCCCAACACTTTTGAAATGTGGGGAGATTTCATGGATGAGGAACCAACTGATGATGCTTATTGGAAAGATTTCATAGAGTAA 1065 0.4122 MAAACITSAFCEMMMGSRGSSDESSGVKKGPWTPEEDKILVEFIQRHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSDEEEQLIINLHSVLGNKWAAIATHLPGRTDNEIKNFWNTHLKKKLLQMGLDPVTHQPRTDHLNLLTNLQHILAAANILTTLTNPPHDINSLRLQSDATTQFAKLNLAQNILQLINNSASSNFDPQLLLNSPAFGSQYSSSSSVTEEALLCQVLGLNMNQYSTLQNITSSSHHHQNQANFLESPQANKFDEQLGSTSATPTLTPSSSLPNLVSASSPEHSPAAKQEQKEVLNTNKEYCSNVNNPNTFEMWGDFMDEEPTDDAYWKDFIE* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1127 354 MobiDBLite consensus disorder prediction 276 311 - -
Aev05g1127 354 MobiDBLite consensus disorder prediction 276 306 - -
Aev05g1127 354 ProSiteProfiles Myb-like domain profile. 24 76 IPR001005 -
Aev05g1127 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 131 IPR017930 -
Aev05g1127 354 PANTHER MYB TRANSCRIPTION FACTOR 21 354 - -
Aev05g1127 354 SUPERFAMILY Homeodomain-like 26 123 IPR009057 -
Aev05g1127 354 CDD SANT 84 127 IPR001005 -
Aev05g1127 354 ProSiteProfiles Myb-like domain profile. 77 127 IPR001005 -
Aev05g1127 354 Gene3D - 28 81 - -
Aev05g1127 354 CDD SANT 31 76 IPR001005 -
Aev05g1127 354 Gene3D - 84 131 - -
Aev05g1127 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 76 IPR017930 -
Aev05g1127 354 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 21 354 - -
Aev05g1127 354 SMART sant 28 78 IPR001005 -
Aev05g1127 354 SMART sant 81 129 IPR001005 -
Aev05g1127 354 Pfam Myb-like DNA-binding domain 82 127 IPR001005 -
Aev05g1127 354 Pfam Myb-like DNA-binding domain 29 76 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1127 Aev-Chr5 7890329 7896553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1127 15 354 MYB Transcription Factor Family AT5G16770 45.869 3.85e-87 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g1127 Myb_DNA-binding 1.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1127 K09422 - gmx:547488 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1127 05 7890329 7896553 Aev05g1127 05 7890329 7896553 ECH