Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1117 ATGCTGTCAGTGGCGCCTTCTGTTGACAGTGCCAAACAGAGCACAGAACTATCTTCTTCACCCAAGGATGCTATTCCTCCTCCAACGGAACAGAAACAACCCTCTCCCCAAACAACCCATATCTTTAAGTCCAGATTACCTGACATACCAATCTCCAACCACCTCCCACTCCACACCTACTGCTTCGAGAGGCTCTCTGAATTCTCCGACCGCCCCTGCCTCATCGTCGGCTCCGCCGCCAAAACCTACACCTATGCAGAGACCTACCTCGCCTCGCAGAAAATCGCCGCCGGATTGTCCAGCCTTGGGATCAAGAAAGGCGACGTGATCATGATCCTGCTCCAGAACTCCGCCGAGTTTGTTCTCTCATTCATCGCCGCTTCAATGATCGGCGCCGTCGCCACCACCGCTAATCCGTTCTACACGTCTGCCGAGATCTTCAAGCAAATCGCAGCCTCCAAATCGAAGCTCGTGATCACCATGGCAATGTACGTAGATAAGCTCCGAGAGCAGGACGCCGTCAATTCGCTGAAATTAGGCGAGGATTTCAAGGTAATCACCGTCGACGATCCGCCGGAGAATTGCCTCCATTTCTCGGTGATATCGGAGGGGAACGAAAACGAGGTTCCGGAGGTTGAGATCCGCCCTGAGGATGCGGTAGCGCTGCCGTTCTCATCGGGAACGACGGGGCTTCCAAAAGGTGTGGTTCTGACGCACAAGAGCTTAACGACGAGCGTGGCGCAACAAGTGGACGGAGAGAATCCGAATCTGTATCTGAAAGCAGAGGACGTTCTTCTGTGCGTGCTTCCCCTGTTTCACATATTCTCTTTGAACAGTGTTCTGTTGTGCGCGCTGAGAGCAGGGAGTGCGGTGTTGCTGATGCAGAAGTTCGAGATAGGGGCGCTGCTGGAGCTGATACAGAAGTACAAGGTCTCGGTGGCGATGGTGGTGCCGCCGCTGGTGCTGGCGCTGGCCAAGAATCCGATGGTGGCGGGCTACGATTTGAGCTCCATAAGGCTGGTGCTGTCAGGGGCGGCGCCGCTGGGGAAGGAGCTGGAGGAGGCTCTCCGGAGCAGGGTGCCTCAGGCGGTTTTGGGACAGGGATACGGAATGACAGAGGCAGGGCCAGTGCTGTCAATGTGTTTGGGGTTTGCCAAGCAACCATTCCCAACAAAGTCAGGGTCATGTGGAACTGTAGTGAGAAATGCAGAGCTCAAGGTTATTGACCCTGAAACTGGTTTCTCTCTTGGCTACAACCAACCTGGTGAAATTTGCATCCGTGGCCAACAGATCATGAAAGGGTATTTGAATGATGATAAAGCGACAGCAACAACTATTGATATAGAGGGTTGGCTGCATACCGGTGATGTTGGTTATATAGATGATGATGATGAGATTTTCATCGTTGACAGAGTTAAGGAACTCATCAAATTTAAAGGGTTCCAAGTGCCTCCAGCAGAACTTGAAGGCCTTCTTGTAAGCCACCCCTCCATTGCAGATGCAGCTGTTGTCCCGCAAAAGGATGTTGCTGCTGGTGAAGTTCCTGTTGCATTCGTTGTGAGGTCAAATGGCTTTGATCTCACTGAAGAGGCTGTAAAGGACTTTATTGCAAAACAGGTAGTGTTTTACAAAAGACTACACAAGGTTTACTTTGTTCATGCAATTCCAAAGTCTCCATCAGGGAAGATATTAAGAAAAGACCTCAGAGCAAAGCTAGAAAACAACACCACCCAAACGCTCTAA 1743 0.5141 MLSVAPSVDSAKQSTELSSSPKDAIPPPTEQKQPSPQTTHIFKSRLPDIPISNHLPLHTYCFERLSEFSDRPCLIVGSAAKTYTYAETYLASQKIAAGLSSLGIKKGDVIMILLQNSAEFVLSFIAASMIGAVATTANPFYTSAEIFKQIAASKSKLVITMAMYVDKLREQDAVNSLKLGEDFKVITVDDPPENCLHFSVISEGNENEVPEVEIRPEDAVALPFSSGTTGLPKGVVLTHKSLTTSVAQQVDGENPNLYLKAEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMQKFEIGALLELIQKYKVSVAMVVPPLVLALAKNPMVAGYDLSSIRLVLSGAAPLGKELEEALRSRVPQAVLGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGFSLGYNQPGEICIRGQQIMKGYLNDDKATATTIDIEGWLHTGDVGYIDDDDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFDLTEEAVKDFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLENNTTQTL* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1117 580 Gene3D - 32 472 IPR042099 -
Aev05g1117 580 Pfam AMP-binding enzyme C-terminal domain 487 562 IPR025110 -
Aev05g1117 580 MobiDBLite consensus disorder prediction 1 26 - -
Aev05g1117 580 MobiDBLite consensus disorder prediction 1 38 - -
Aev05g1117 580 SUPERFAMILY Acetyl-CoA synthetase-like 53 574 - -
Aev05g1117 580 CDD 4CL 51 568 - -
Aev05g1117 580 Pfam AMP-binding enzyme 64 478 IPR000873 -
Aev05g1117 580 ProSitePatterns Putative AMP-binding domain signature. 222 233 IPR020845 -
Aev05g1117 580 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 40 571 - -
Aev05g1117 580 Gene3D - 473 578 IPR045851 -
Aev05g1117 580 PANTHER 4-COUMARATE--COA LIGASE 3 40 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1117 Aev-Chr5 7814079 7819419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1117 35 485 Monolignol Biosynthesis Gene Families AT1G65060 71.806 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1117 K01904 - gmx:547492 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1117 05 7814079 7819419 Aev05g1117 05 7814079 7819419 ECH