Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1114 ATGAACGAAGAATGTTGTTCTGGCCCATGTCTAACTAAAGATACTTTGGGCCCAGGCCCATTTCAATTCATACTAGAGGAGTCGCTGAGCCCAGTGTATGCTATAGCTGAGAAAATGGCGTCTGAGCCCTCTCCTTCTCCGAAGATCCTTCTAGCAAAGCCAGGCATCGTCGCCGGCGGTCCAGTCGCCGGGAAATTCGGTCGTGGAGGCGCCGGCGATGACGACACCGCGCAGCTTCGTTCTCGTCTTCCTTCTGTAGCGTCGCTCAACCTTCTCTCTGATTCCTGGGATTTCCACATTGATCGCTTTCTCCCTTTTTTGACAGAAAACACGGATTTCACTGTGATTGGAGTGATTGGTCCACCTGGAGTTGGCAAGTCAACTATTATGAATGAAATTTATGGTTTTGATTCAACTTCACCTGGAATGTTGCCACCTTTTGGTCTACAATCTGAAGAAACAAGAGCCATGGCAAGGCATTGTTCTACGGGAATTGAACCCAGGGTTTCTTCTGAACGTATTATTCTTCTTGATACCCAGCCTGTATTTAGTGCTTCAGTTTTAGGGGAGATGATGAGACCAGATGGCTCTTCAACAATTTCAGTGATAAGTGGAGAATCCCTGTCAGCTGAATTGGCTCATGAGATTATGGGTATTCAGCTTGCTGTTCTACTAGCATCTGTATGTCATATTCTTCTGGTGGTGTCAGAGGGAGTTCATGATGATAGCATGTGGCATTTGATGTTGACGGTTGACTTGTTAAAGCATGGCATATCAGATCCATCCTTGCTGGCTTCATCGGTTTCACAGAGCTCTAGTTCAGGGCTTGAGAAAGATTACAAAGTTCCTGATCATGAAGAGTATATGGCTACCTCAGTTTTTATACACACCAAGTTGCACGATCTAGACTTTACTCCTCAAAATGTTGTGCAGTTGAGGAAGACGCTTACGCAGTATTTCAAACCATCGTCATTTGTGACAGAACAACACACTGGAAGCAAGCAAGAGGAGCATGTTTCGTCTTGTGTGGTTCATGGTAGTAATATGGATTCGAACATGCTAAATTTTTATGCGATCCCATTAAAGAAAAAGGAAGAAAACCAAAGAGCTCAACATGAAAGTTTCGTATCAGCATTATGGGAATTACGGGATCAGATACTATCCATGAAGTCGCCGTCTTTCACAAGATCCGTGTCGGAGCGTGAATGGTTGAAGAATTCAGCCAAGATATGGGAACAGGTAAAAACCTCCCCAACAATATTGGAATACTGCAGAACACTTCAACATTCTGAGATCAAAATGATGAGGCTGAAGACATATGCGGGTCTTAGTTTGATTGCAACTCTAGCAATTACATATCATGCATTTAACAGTAGAGGCCAGTTTTATCCGGCAATGGTGTATCTTTCGACTTCCAAGATCAGCTTAGTTCTTCTTCTCAACATGGGTTTGGTCATTATGTGTATTCTATGGCAATTAACTAAAAAGATATTCTTGGGTTCGCTCCGAGAGGCGGAGGTAGAAAGGCTTAACGAGCAGTCATGGAGGGAGGTTATGGAAATCCTCTTTGCAATTACTATTTTCAGGCAGGATTTCTCTGTTACGTTCCTTGCTATGGTCACAGCACTGTTGTTAATCAAAGCTTTGCATTGGTTGGCTCAGAAAAGGGTCGAATACATTGAGACAACTCCTTCGGTTCCCATGTTGTCCCATGTTCGAATTGTATCTTTTATGGGTTTCCTTCTTCTTCTAGATAGCCTGTTCTTGTACAATTCTATGAAGCATCTGTTACAATCATGGCAGCCGTCAGTCTCGATATTCTTTTCTTTTGAGTACATGATATTGGCAACGACAACAGTGTCAATTTTTGTAAAATATCTTTTCTATGTCAGTGACATGCTTATGGAGGGACAATGGGAAAGGAAACCAGTCTTCACATTTTACCTGGAGCTTGTTAGGGACTTGCTTCACCTGTCTATGTATCTGTGCTTCTTCCTTGTAATTTTTGTAAACTATGGTGTTCCTTTGCACTTAATACGGGAGCTATACGAGACATTCAGGAACTTCAAAGTTCGTGTTGCAGATTACATACGATATCGTAGGATCACTTCAAATATGAATGACCGGTTTCCGGATGCATCCCCCGAAGAGCTTAATGCAAGTGATGCAACCTGCATTATCTGTCGTGAAGAGATGACTACTGCTAAGAAACTTATATGTGGACATCTTTTTCATGTTCATTGCCTTCGATCATGGCTGGAGCGGCAACATACTTGCCCTACCTGCAGAGCTCTGGTTGTTCCACCAGAAAATGGGGCAACTTCAGCTGGAGGGCAGCAAGGATCACAATCTGACGCTCATCGTCAGGGGTCAGGCACTGGAAGCTCAGGTCAAACTGATGCTGGAAGTACAGGGGCAAGTGATAATTTGAGTCGGCACCAAGCTCGACTCCAAGCTGCTGCTGCTGCTGCTTCAATATATGAGAAGTCTTATGTTTACCCCTCCCCTACTTCTTTAGTATGCTCTCCTGGGCACGCTCTTCATCCCCAAGTTCAAGCATCGATGGGTGAATCTATTAATAGCGGGCTTAACGGAGAACAAGCTTCTAGTGAACAAGCACAAAAGCAGTTTATGATTCCTGGTGGACCAATTGTATCCTTTCCTCAAACGGGACACTTCCATTTTCTTCCTTCCCACGCACACCCGGGCCCCATGAATTATGGAGTAGAGTTTGGAAATGATCCAAATATATCAAACTCTCTGCTTGAAGTTCAAAAGAAACTTATTCAATACCAGATTGAGATTCTACAAAATCAGCTCAAGCTTTTGCAGAGGACAACGGCTGACAAGAGTATTGATGAGGGCACATCATCATCAGATAGCAGAGGCAAGCAAGTCGCATCCTCGTCGTCTGGGTCTGGTCATGGTTATCATGAGGTCCAAGATGAAAAATCATAA 2958 0.4368 MNEECCSGPCLTKDTLGPGPFQFILEESLSPVYAIAEKMASEPSPSPKILLAKPGIVAGGPVAGKFGRGGAGDDDTAQLRSRLPSVASLNLLSDSWDFHIDRFLPFLTENTDFTVIGVIGPPGVGKSTIMNEIYGFDSTSPGMLPPFGLQSEETRAMARHCSTGIEPRVSSERIILLDTQPVFSASVLGEMMRPDGSSTISVISGESLSAELAHEIMGIQLAVLLASVCHILLVVSEGVHDDSMWHLMLTVDLLKHGISDPSLLASSVSQSSSSGLEKDYKVPDHEEYMATSVFIHTKLHDLDFTPQNVVQLRKTLTQYFKPSSFVTEQHTGSKQEEHVSSCVVHGSNMDSNMLNFYAIPLKKKEENQRAQHESFVSALWELRDQILSMKSPSFTRSVSEREWLKNSAKIWEQVKTSPTILEYCRTLQHSEIKMMRLKTYAGLSLIATLAITYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPSVPMLSHVRIVSFMGFLLLLDSLFLYNSMKHLLQSWQPSVSIFFSFEYMILATTTVSIFVKYLFYVSDMLMEGQWERKPVFTFYLELVRDLLHLSMYLCFFLVIFVNYGVPLHLIRELYETFRNFKVRVADYIRYRRITSNMNDRFPDASPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGATSAGGQQGSQSDAHRQGSGTGSSGQTDAGSTGASDNLSRHQARLQAAAAAASIYEKSYVYPSPTSLVCSPGHALHPQVQASMGESINSGLNGEQASSEQAQKQFMIPGGPIVSFPQTGHFHFLPSHAHPGPMNYGVEFGNDPNISNSLLEVQKKLIQYQIEILQNQLKLLQRTTADKSIDEGTSSSDSRGKQVASSSSGSGHGYHEVQDEKS* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1114 985 Coils Coil 926 946 - -
Aev05g1114 985 Pfam Ring finger domain 724 763 IPR001841 -
Aev05g1114 985 SMART ring_2 725 762 IPR001841 -
Aev05g1114 985 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 697 770 IPR013083 -
Aev05g1114 985 PANTHER RING ZINC FINGER PROTEIN 434 876 - -
Aev05g1114 985 ProSiteProfiles Zinc finger RING-type profile. 725 763 IPR001841 -
Aev05g1114 985 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 191 IPR027417 -
Aev05g1114 985 MobiDBLite consensus disorder prediction 772 813 - -
Aev05g1114 985 PANTHER - 434 876 - -
Aev05g1114 985 MobiDBLite consensus disorder prediction 773 813 - -
Aev05g1114 985 CDD RING-H2_synoviolin 722 763 - -
Aev05g1114 985 MobiDBLite consensus disorder prediction 949 976 - -
Aev05g1114 985 SUPERFAMILY RING/U-box 705 769 - -
Aev05g1114 985 Gene3D - 106 430 IPR027417 -
Aev05g1114 985 MobiDBLite consensus disorder prediction 949 985 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1114 Aev-Chr5 7792532 7801957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1114 434 970 C3H Transcription Factor Family AT3G16090 63.838 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1114 K10601 - gmx:100816441 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1114 05 7792532 7801957 Aev05g1114 05 7792532 7801957 ECH