Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1088 ATGGCAGAAGAATTTCCGAAACCCTTGAACGTTGTACCAGAGGTTATACTCAAGAAGAGGAAAAGCACCGAAGCTTTCGCGTTGAGGAAAAAAGCCCAGCTCGAGCGCACCAATTTCCAAAATTCCAAGAAGACCAATGACTCCATTAAAAAGCCCGAGGATTTCGTTCTCGAATATCGCAACATGGAGCTGGACCTTATTAGAATGAAACGCAGACTTAAGAGGAAACTACCCGTGTTGAACTCAGACTCCAAGCCCTTGATAATTATTCGAATTCAGGGGAAAAAGGACATGCATCCAAAAACTAGGAAGGTGTTGTACAGCTTGGGGTTGAGAAGGATATTCGGTGCTGTTTTTGTGAAGCCATCTGAAGGAGTATTGGCCAAGCTTAAGAGGGTGGAACCATTTGTTACATATGGATATCCGAATCTCAAGAGCATAAAGGAGCTAATTTACAAGAAGGGCTATGCGAGAATAGACAAGAGGAAAGTTCCTTTGACAGATAATAACATTATTGAGCAGGAATTAGGAAAGCATGGTATTGTATGCATAGAAGACATGGTGCACGAGATAACTAATATTGGGCCACACTTTAAGGAAGTTGTCAGATTTTTGTGGCCCTTTGAACTCAACAAACCGGGAGAAGGATTGAGAGGATCGAAAACCGTATTCAAGGATGGCGGTGACACAGGGAACCCGCCTCTCCGCCCCTCCTCCTCGCATCTCAGCCTCAGAAAACTCAAGAAGAAAGTCATGGCAATGAACCTTGCCAGGTCTGCTAGACACATTCTTACTACAAAAGAGGCAGTTAGGGTTTCATGCCAAAGAACCTATGCCACTGGTAAAGCAAAGAAGGGATCTAAAGGGGGTGGCGCCGCCGATGGACCCAAAGCGTCAACCCTTAGCAAGGAAGTTAAGTCAAGTACAGTTGTAGGTGGCAACATTCTCAAGGAAGGGGCTGATCCGAAAATCCTAGCTGATTCTGAATACCCTGATTGGTTGTGGCATTTGCTCGATAAGCGCCCTGCACTGAGTGAATTGCGTAGGAAGGATATCGAAAAACTCCCTTATGAAGATCTTAAACGCTTTGTTAAGCTGGATAACAGAGCAAGGATCAAGGAGAATAACTCTCTCAAGGCCAAGAATTAG 1149 0.4465 MAEEFPKPLNVVPEVILKKRKSTEAFALRKKAQLERTNFQNSKKTNDSIKKPEDFVLEYRNMELDLIRMKRRLKRKLPVLNSDSKPLIIIRIQGKKDMHPKTRKVLYSLGLRRIFGAVFVKPSEGVLAKLKRVEPFVTYGYPNLKSIKELIYKKGYARIDKRKVPLTDNNIIEQELGKHGIVCIEDMVHEITNIGPHFKEVVRFLWPFELNKPGEGLRGSKTVFKDGGDTGNPPLRPSSSHLSLRKLKKKVMAMNLARSARHILTTKEAVRVSCQRTYATGKAKKGSKGGGAADGPKASTLSKEVKSSTVVGGNILKEGADPKILADSEYPDWLWHLLDKRPALSELRRKDIEKLPYEDLKRFVKLDNRARIKENNSLKAKN* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1088 382 CDD Ribosomal_L7_archeal_euk 87 232 IPR035808 -
Aev05g1088 382 MobiDBLite consensus disorder prediction 280 305 - -
Aev05g1088 382 PANTHER 60S RIBOSOMAL PROTEIN L7-1 4 232 - -
Aev05g1088 382 Gene3D - 87 192 IPR036919 -
Aev05g1088 382 Pfam Ribosomal L30 N-terminal domain 12 76 IPR012988 -
Aev05g1088 382 SUPERFAMILY Ribosomal protein L30p/L7e 88 232 IPR036919 -
Aev05g1088 382 Pfam Ribosomal protein L30p/L7e 87 137 IPR016082 -
Aev05g1088 382 TIGRFAM uL30_euk: 60S ribosomal protein uL30 13 232 IPR005998 GO:0000463|GO:0003735|GO:0022625
Aev05g1088 382 Pfam Mitochondrial ribosomal protein L37 302 379 IPR013870 -
Aev05g1088 382 PANTHER 60S RIBOSOMAL PROTEIN L7 4 232 IPR039699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1088 Aev-Chr5 7630725 7636404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1088 1 232 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 53.814 3.20e-77 237