Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1084 ATGCAAGAGTGCAACAACAACAACAATGTAATAGGCCAAGCCCAACCATCAAACTACAGAGGAGTTCGAAAGAGAAAATGGGGCAAATGGGTGTCGGAAATCAGAGAGCCAGGTAAGAAGACTAGAATATGGTTAGGGAGCTATGAGTTGCCCGAAATGGCAGCTGCGGCCTACGATGTGGCCGCGTTGCACCTTAGAGGACGTTTAGCGAGGCTCAACTTCCCGGAATTGGTCGAGACACTCCCGCGTCCAGAGAGTTCTAGATCCGAGGATGTCCAAGCCGCGGCGCAACAAGCCGCATTGATGTTCAAGAGGCCAATGGCAATGACATCGTCATCGCCGTCGACCGAGGTAGTTGATAAGGGTAATGTTGTTCCGGTTAGGGTGGGATTGTCCCCAAGCCAAATTCAGGCTATTAATGAGTCCCCATTAGAGTCACCAAAGATTTGGATGGTGCAAATGGCAGAGGCACTCATGTTTGGGCTCAATGTTATTGATGATGAGTCCATGATGGATTGCTGTGGGGATGATGATGTTTTGGAGTTGAGTGGTTGGGAAGAAATTCAGCATGACTCATTGTGGGACTCATGA 591 0.4924 MQECNNNNNVIGQAQPSNYRGVRKRKWGKWVSEIREPGKKTRIWLGSYELPEMAAAAYDVAALHLRGRLARLNFPELVETLPRPESSRSEDVQAAAQQAALMFKRPMAMTSSSPSTEVVDKGNVVPVRVGLSPSQIQAINESPLESPKIWMVQMAEALMFGLNVIDDESMMDCCGDDDVLELSGWEEIQHDSLWDS* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1084 196 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF022 8 167 - -
Aev05g1084 196 SUPERFAMILY DNA-binding domain 17 76 IPR016177 GO:0003677
Aev05g1084 196 Gene3D AP2/ERF domain 18 77 IPR036955 GO:0003700|GO:0006355
Aev05g1084 196 PRINTS Ethylene responsive element binding protein signature 57 77 IPR001471 GO:0003700|GO:0006355
Aev05g1084 196 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Aev05g1084 196 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
Aev05g1084 196 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 167 - -
Aev05g1084 196 Pfam AP2 domain 18 67 IPR001471 GO:0003700|GO:0006355
Aev05g1084 196 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
Aev05g1084 196 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1084 Aev-Chr5 7610493 7611083 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1084 12 195 AP2-EREBP Transcription Factor Family AT1G71450 51.087 3.95e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev05g1084 AP2 3.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1084 - - gmx:100788567 259.225