Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1081 ATGGACATGCCTTCCTCAAGTTCACACCACCACCATACTACAGGTCCTGCTACTTCACCGTACAGAGGTGTCCGCAAGAGGAAATGGGGCAAATGGGTGTCTGAAATCCGCGAACCGGGTACCAAGACCCGGATATGGCTAGGAAGCTTTGAGACGCCGGAGATGGCGGCTGCGGCCTACGATGTTGCCGCTTTGCACTTTAGGGGCCGTGATGCAAGGCTCAATTTCCCTGAGCTTGCAAGCACTCTTCCTCGCCCTGTAAGCAACAATGCTGACCACATACGCATGGCCGCACATGAGGCTGCCCTCAGGCTCAGGACCAATACCCCTGCAGCAGAGTCTGGTGGTGGTGGAACCACAGGCTCTGCTGGGGTGCCGGTCACTGTGAGGCTGTCCCCAACACAGATTCAGGCCATCAATGACTCTCCTCTGGATTCCCCCAAGACATGGATGCAAATACCGGACACTTTCATGATGGATGATTCCATGGTGTTTGCAAATGGGTATGATCAATTTGATGAGGGCAATGAGTGGAATGATTCTCTTTGGGATCCTTAG 558 0.5376 MDMPSSSSHHHHTTGPATSPYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGRDARLNFPELASTLPRPVSNNADHIRMAAHEAALRLRTNTPAAESGGGGTTGSAGVPVTVRLSPTQIQAINDSPLDSPKTWMQIPDTFMMDDSMVFANGYDQFDEGNEWNDSLWDP* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1081 185 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Aev05g1081 185 Gene3D AP2/ERF domain 20 78 IPR036955 GO:0003700|GO:0006355
Aev05g1081 185 SUPERFAMILY DNA-binding domain 19 78 IPR016177 GO:0003677
Aev05g1081 185 MobiDBLite consensus disorder prediction 1 15 - -
Aev05g1081 185 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Aev05g1081 185 Pfam AP2 domain 21 69 IPR001471 GO:0003700|GO:0006355
Aev05g1081 185 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 184 - -
Aev05g1081 185 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF021 12 184 - -
Aev05g1081 185 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Aev05g1081 185 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Aev05g1081 185 CDD AP2 21 79 IPR001471 GO:0003700|GO:0006355
Aev05g1081 185 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1081 Aev-Chr5 7589085 7589642 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1081 19 185 AP2-EREBP Transcription Factor Family AT1G71450 60.819 4.87e-62 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev05g1081 AP2 3.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1081 - - gmx:100815719 286.96