Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1073 ATGAGTCGCACTTCAGGATCATCATCATCAACAAGCAAGAAGCTGAAGGGTGTTCGCCGGAGAAAGTGGGGGAAGTGGGTCTCAGAGATTCGTGTCCCTGGGACTCAAGAGCGTCTTTGGTTGGGGACCTATGCGACGCCGGAAGCTGCCGCGGTGGCTCACGATGTCGCCGTGTATTGTCTCCGAAAGCCCTCTTCTTTGGACAAACTCAACTTCCCTGAAACGCTGTCGTCTTACTCTGTTTTTCATCAGCAGAACAGAGACTTATTGTCTCCCAGATCTGTTCAGAAGATCGCTTCCGATGTTGCGATGGATGTTGATGCACGCAATATTGCTGCTGCAGGAGGCAAAATGCAGAGCACCATTGCAGCAGAAAGTAGTTGTTGTCAAAGAGGGAACAGGAGTGATGGTGGTGATAACAATAACAATAACAATAATAATTGTGATGGAACATTTGGAGGAGGAGGTGGTGGTGATGATGACGACGATGATTCAGGTGGAAGAGTGTCTTGGTGGGATGATTTGGGTGGTGATTGTAGTGGGGACGCATTGAGCATTTCCGTTGAGGATTATCTCGGATAG 582 0.488 MSRTSGSSSSTSKKLKGVRRRKWGKWVSEIRVPGTQERLWLGTYATPEAAAVAHDVAVYCLRKPSSLDKLNFPETLSSYSVFHQQNRDLLSPRSVQKIASDVAMDVDARNIAAAGGKMQSTIAAESSCCQRGNRSDGGDNNNNNNNNCDGTFGGGGGGDDDDDDSGGRVSWWDDLGGDCSGDALSISVEDYLG* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1073 193 PRINTS Ethylene responsive element binding protein signature 37 53 IPR001471 GO:0003700|GO:0006355
Aev05g1073 193 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Aev05g1073 193 MobiDBLite consensus disorder prediction 153 172 - -
Aev05g1073 193 MobiDBLite consensus disorder prediction 1 20 - -
Aev05g1073 193 ProSiteProfiles AP2/ERF domain profile. 14 73 IPR001471 GO:0003700|GO:0006355
Aev05g1073 193 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF020 5 135 - -
Aev05g1073 193 CDD AP2 13 75 IPR001471 GO:0003700|GO:0006355
Aev05g1073 193 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 5 135 - -
Aev05g1073 193 SUPERFAMILY DNA-binding domain 14 73 IPR016177 GO:0003677
Aev05g1073 193 Pfam AP2 domain 14 63 IPR001471 GO:0003700|GO:0006355
Aev05g1073 193 SMART rav1_2 14 79 IPR001471 GO:0003700|GO:0006355
Aev05g1073 193 Gene3D AP2/ERF domain 14 75 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1073 Aev-Chr5 7541782 7542363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1073 14 108 AP2-EREBP Transcription Factor Family AT1G71520 60.825 1.69e-36 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev05g1073 AP2 6.3e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1073 - - gmx:100816257 197.593