Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1063 ATGGACAATTCTCCCTCAGAAACTTATAGTATTTCTACAACCTCAAAAAGAGATAATGATGATGATGATGTTCTCAATCTTGAACATCAAACAAATATGAAGAAAATGAAGGAAAAAGATCAAACATTTGATGGAGCAGATCATCATGAGGGCTCCAATCCCAATAATTCTCTAACTTCGCTGAATTCCATGGATCTCTCCATAGATGATTCGGTTTATGACCGATCAATGGTTGAATTTGATTTCTTCAACTCTCGAAATGACATAATATCTGATTCTTCAAATGTTGATACTAAGGAAAACACTTCTGAAACGAGGACTTTCTCGTGCAATTTCTGCAAGAGAGAGTTCTCTTCTTCACAAGCTTTGGGAGGACACCAGAACGCTCACAAGCACGAGCGTGCAATCGCGAAACGACGCCAAGGGATGGATCCCATTGGTGTTCTTGGGCATCCTCATCATCATCACTTTTCTTATTATTACCCTTACCCTGGCATTTCCACAAACACCTTGTATAGTGCCTATTACAATAGGGGTTCGTATCCTAATTGGAGTAACCTCAATTACGGTACAAGGTGGTTACAAGGTGGTAGTAGTAGTAGTGGAGTTGGAATCATGAGAAGTGGTGCTTCAAATTTGAGGATGATAGAAAATGGCGATTCTTCTTCTGCAAATAATAATGTTGTTAGTCCAAATTCAACAACCATGGACAAATCAATTATGAAGGGGGGCAAGCTTGATGATCATCCTAAACAAGAAGATAAGTCATCTAGTAGTGAGCATTCTGAGATTGATTTGACACTTAAACTCTAA 813 0.3875 MDNSPSETYSISTTSKRDNDDDDVLNLEHQTNMKKMKEKDQTFDGADHHEGSNPNNSLTSLNSMDLSIDDSVYDRSMVEFDFFNSRNDIISDSSNVDTKENTSETRTFSCNFCKREFSSSQALGGHQNAHKHERAIAKRRQGMDPIGVLGHPHHHHFSYYYPYPGISTNTLYSAYYNRGSYPNWSNLNYGTRWLQGGSSSSGVGIMRSGASNLRMIENGDSSSANNNVVSPNSTTMDKSIMKGGKLDDHPKQEDKSSSSEHSEIDLTLKL* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1063 270 ProSitePatterns Zinc finger C2H2 type domain signature. 110 132 IPR013087 -
Aev05g1063 270 MobiDBLite consensus disorder prediction 216 239 - -
Aev05g1063 270 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 135 IPR013087 -
Aev05g1063 270 MobiDBLite consensus disorder prediction 1 62 - -
Aev05g1063 270 PANTHER ZINC FINGER PROTEIN 3-LIKE 3 174 - -
Aev05g1063 270 MobiDBLite consensus disorder prediction 14 47 - -
Aev05g1063 270 SUPERFAMILY beta-beta-alpha zinc fingers 95 143 IPR036236 -
Aev05g1063 270 MobiDBLite consensus disorder prediction 241 270 - -
Aev05g1063 270 Gene3D Classic Zinc Finger 84 145 - -
Aev05g1063 270 MobiDBLite consensus disorder prediction 216 270 - -
Aev05g1063 270 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 3 174 IPR044246 GO:0009788
Aev05g1063 270 MobiDBLite consensus disorder prediction 48 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1063 Aev-Chr5 7465254 7466066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1063 65 162 C2H2 Transcription Factor Family AT5G01860 38.776 1.39e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1063 - - gmx:102663393 133.65