Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1046 ATGTATAATAATTCAGCGCAATTGTGTTTACTATTGATCTTTGTTCTCCATGTTCACATCGCAATAGGTGAACAACAAAAAATTTGCGATACAATATCATGCGGCGAAATTGATATTCAATTTCCGTTTGGCTTGAAAGGATCATCCAACAATAATAACTACCCAAGATTCCAACTTTCATGCGACAACAACAGCAACACGATTCTCACACTCCCAAGTTCAGGAGATTTGGTCGTGAAAAGCATCAACTACGTTGACCAAACAATAAAAGTCAACGACCCTAGTGGGTGCCTTCCGAAACGCTTCTTACACAACTTGAGCTTCTCTGGTTCCCCATTCACGCTCAACGACGCCGTTTACGGGTTTCATAACCTCACTTTCCTTCGTTGCCCTTCCAACGTGACACACTCATATTCATATTCATATCCACTGCCACCAATTTCTTGCCTCAGCAGCGATCACATAGGAAACTCCGAATCAACGTCGTCGGTAGTGATCGTTTCTTCGAATTCGTGGTGGGAACCGTCAACGACGTTGTTGTTGTTTTCCGAGTGCGAGGTGATGACGTGGGCTTTTGTTCCTGTTCCAAACATGTCCTTGCGGTTTGATCCAAACAGTGATATTGAGTTGGTGTGGAAGGAGCCTAGGTGTGGGGATTGTGCTGCTCGTGGACAACTTTGTGGCTTCATCACCAATTCATCATCAACTCTTCAAGTGGGATGTTTCTCCGATCCAAACAAAAGCCAGGATCTGTCAAGAAGTGCCAAATATGGTATAACAATAGGAGTGGGAGTTACTGGTCTCATATCTATATTTGGGCTTTGTTGCTTGCTCTCAAGTCAGTTCAAGATGCGCACCCATTTCAACAGGCCCATAATAGTGCTTCCTATTCCTACTGATGCACAACCAGGCCCAACCATAATGGGCCTAGATGGGCCTACAATTGAGAAATTCCCTAAGACTCTCATTGGAGAAAGTGGTAGCTTACCAAAGCCCAATGATAAAACATGCCCAATTTGCCTATGTGAATATGAGCCCAAGGAGTCTTTGAGGACCATACCTGATTGCAACCATTACTTTCATGCACACTGTGTAGATGAGTGGCTCAAGATGAACCCTACTTGTCCCATATGTAGGAATTCACTAGAAGGGTCCTCTAATTCTTTTTCTCCTTCTTCTTTGTATATAACTTTGTCATTATCCTCTTCTACACAGATAATGCATATCCCACCTCATATATTTTAA 1245 0.4297 MYNNSAQLCLLLIFVLHVHIAIGEQQKICDTISCGEIDIQFPFGLKGSSNNNNYPRFQLSCDNNSNTILTLPSSGDLVVKSINYVDQTIKVNDPSGCLPKRFLHNLSFSGSPFTLNDAVYGFHNLTFLRCPSNVTHSYSYSYPLPPISCLSSDHIGNSESTSSVVIVSSNSWWEPSTTLLLFSECEVMTWAFVPVPNMSLRFDPNSDIELVWKEPRCGDCAARGQLCGFITNSSSTLQVGCFSDPNKSQDLSRSAKYGITIGVGVTGLISIFGLCCLLSSQFKMRTHFNRPIIVLPIPTDAQPGPTIMGLDGPTIEKFPKTLIGESGSLPKPNDKTCPICLCEYEPKESLRTIPDCNHYFHAHCVDEWLKMNPTCPICRNSLEGSSNSFSPSSLYITLSLSSSTQIMHIPPHIF* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1046 414 Pfam Ring finger domain 336 379 IPR001841 -
Aev05g1046 414 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 7 401 - -
Aev05g1046 414 Pfam Wall-associated receptor kinase galacturonan-binding 29 93 IPR025287 GO:0030247
Aev05g1046 414 CDD RING-H2_PA-TM-RING 336 379 - -
Aev05g1046 414 ProSiteProfiles Zinc finger RING-type profile. 337 379 IPR001841 -
Aev05g1046 414 SUPERFAMILY RING/U-box 331 384 - -
Aev05g1046 414 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 401 - -
Aev05g1046 414 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 307 384 IPR013083 -
Aev05g1046 414 SMART ring_2 337 378 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1046 Aev-Chr5 7375021 7377012 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1046 23 380 C3H Transcription Factor Family AT2G25410 33.690 2.71e-47 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1046 - - cam:101497311 380.178