Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1045 ATGGCTACTTTACCATATTATTCCATTTTCTCCCTAATATTTCTCTTGATTGGCCATACAATAAGAACAAACTCTCATCCAAGTAACTGTGACACCATGTCTTGCAAAAGCCCCAAAACTGATCCAATTCCCTTCCCTTTTTGGGTGAGTGAGCCCAACCAAAGCAATTACCGATGTGGGTACCCAGGTTTCGAGCTAAAGTGTAGCAACAAGAACCAAACAATACTCAATTTACCAGAATCAGGAGAATACATAGTGAAAACAATACTAAATCAAGATCGTAATATTTGGGTCAACGTTGACTCAGATGAGTGCCTCCCAAGAAGAATCATGAGAAACAGAGGATTCAGCCTCGCGGGTTCACCGTTTCAATTGGGAAGTGCTTTCATTTTTGCAAATTTCTCTTTTTTCAATTGTTCCTATGACCCAACATCATATTTATCTTCCTCGGACATGACTACTGAATTTTCAATAGACTGTCTAAGCCCTAGGGACACTAACTATTCGGTGTTGGCTGTTTTGTCCAATCATGTACATCAAAAGCTGTGGATGATTAACTCATCGTGCCACTTGATTTCTTCAGTTATGGTCCCTGTTCTGGGGATCAAAAGTGATGTGTATTGGACTAGTTACTTTGTTGACATACAATTGCAGTGGGACAATAATCTTCCAGACCATAATCTTCCAGACCAATCTCAAGGTTTTTCAAAGAAAGCAGAGTACGGATTAACTATAGGACTGGGGTTACCAGGATTCATTGGTATCATTGGATTAGCATGTTTGTTCGACCGTTGGAGGAGAACACACGATGAACGACACCAACATAGTACAGAATTTTCTACCACAATGTCCATGGGTAATAATAATAATAATATACACCTTCTTCCTGTAGTAATAATGGGTCTTGATGGAGAATCGATAGAGAAATATCCGAAAACCCAAATTGGTGATAGTGGAAGATTGCTCAAGCCCAATGACACTACTTGTTCTATATGTCTCTGTGAGTATCAGCCCAAGGAGGTGCTGAGGACTATACCAGAGTGCAATCACTATTTTCACGCCGATTGTATTGATGGGTGGCTTAGGATGAATGCCACGTGTCCATTGTGTCGAAACTTACCTTTGTGA 1128 0.4025 MATLPYYSIFSLIFLLIGHTIRTNSHPSNCDTMSCKSPKTDPIPFPFWVSEPNQSNYRCGYPGFELKCSNKNQTILNLPESGEYIVKTILNQDRNIWVNVDSDECLPRRIMRNRGFSLAGSPFQLGSAFIFANFSFFNCSYDPTSYLSSSDMTTEFSIDCLSPRDTNYSVLAVLSNHVHQKLWMINSSCHLISSVMVPVLGIKSDVYWTSYFVDIQLQWDNNLPDHNLPDQSQGFSKKAEYGLTIGLGLPGFIGIIGLACLFDRWRRTHDERHQHSTEFSTTMSMGNNNNNIHLLPVVIMGLDGESIEKYPKTQIGDSGRLLKPNDTTCSICLCEYQPKEVLRTIPECNHYFHADCIDGWLRMNATCPLCRNLPL* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1045 375 Pfam Wall-associated receptor kinase galacturonan-binding 30 99 IPR025287 GO:0030247
Aev05g1045 375 SUPERFAMILY RING/U-box 322 372 - -
Aev05g1045 375 Pfam Ring finger domain 328 371 IPR001841 -
Aev05g1045 375 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 298 374 IPR013083 -
Aev05g1045 375 SMART ring_2 329 370 IPR001841 -
Aev05g1045 375 CDD RING-H2_PA-TM-RING 328 371 - -
Aev05g1045 375 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 221 - -
Aev05g1045 375 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 227 374 - -
Aev05g1045 375 ProSiteProfiles Zinc finger RING-type profile. 329 371 IPR001841 -
Aev05g1045 375 PANTHER RING-H2 FINGER PROTEIN ATL20-LIKE 11 221 - -
Aev05g1045 375 PANTHER RING-H2 FINGER PROTEIN ATL20-LIKE 227 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1045 Aev-Chr5 7362605 7364631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1045 25 374 C3H Transcription Factor Family AT2G46495 31.006 1.14e-38 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1045 - - adu:107488400 343.969