Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1030 ATGGAAGAGCGTCCACAGAAGAATAAGGCAAAGGTCTCGGCCACAACCACTGGTACAACCTCTGAAGAAGTGAGCAGTAATGAGTGGGAATTCATAGAGATGAGCGAGCAAGAGGAAGATCTTATTCGCAGGATGTACGGGCTTGTTGGAGATAGGTGGGATTTGATAGCGGGTCGCATTCCTGGTCGTAAAGCAGAAGAAATAGAGAGGTTCTGGATCATGAGACACGGAGATGCTTTTTCTGTTAGAAGAAACCAACATAAAACGATTAAAGCCAGAAACTCATCGTGA 291 0.4536 MEERPQKNKAKVSATTTGTTSEEVSSNEWEFIEMSEQEEDLIRRMYGLVGDRWDLIAGRIPGRKAEEIERFWIMRHGDAFSVRRNQHKTIKARNSS* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1030 96 Gene3D - 34 96 - -
Aev05g1030 96 PANTHER MYB-LIKE TRANSCRIPTION FACTOR ETC3 8 88 - -
Aev05g1030 96 SUPERFAMILY Homeodomain-like 35 73 IPR009057 -
Aev05g1030 96 MobiDBLite consensus disorder prediction 10 27 - -
Aev05g1030 96 CDD SANT 33 72 IPR001005 -
Aev05g1030 96 MobiDBLite consensus disorder prediction 1 27 - -
Aev05g1030 96 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 8 88 - -
Aev05g1030 96 Pfam Myb-like DNA-binding domain 34 73 IPR001005 -
Aev05g1030 96 SMART sant 30 78 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1030 Aev-Chr5 7255409 7257186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1030 34 72 MYB Transcription Factor Family AT5G52600 58.974 6.32e-12 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev05g1030 Myb_DNA-binding 1.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1030 K09422 - gmx:100814431 130.183