Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1020 ATGACGACAACCACAGAACCAGACCCACCACCCAAGCTTCCCTACCCGAGACTCGTTAGAATAACCGTCACTGACACCGACGTCACCGACTCCTCCAGCGACGACGAACAAGAAACCTTCCGCTCCCGTTCCTCCACGCGCCGCCACCGACAGAAGAAGTTCGTCAACGAGATTGTTATGGAGCCCTGCTCAAGCCAAAACGACGGCGTCGTTTCGAGGAAGAGAAGCAGGGCAAACAAGTCCACAACTACCGCCGGCGGAAAGGTCAGAGCTCCGGCGAGTCGCAGGCAGGCGAAGTTCTCCGCCGGAAAGAAATTCCGGGGAGTGAGGCAGAGGCCGTGGGGGAAATGGGCGGCGGAGATAAGAGACCCGTCACGGCGCGTGAGGCTGTGGTTGGGTACATACGACACAGCTGAGGAAGCTGCCATGGTGTACGACAACGCGGCCATTAAGCTGCGTGGACCCGACGCGCTCACCAATTTCATAACGCCACCAGCAACAGCAACAAAAACGACAACGCTGGACCACAAAACGACGACGGTTGTTATAAACGGTTACAATTCCGGCGACGAGTCTCAAAACACTACCACCAACAACAACTTGTTTTCCCCAACTTCGGTTCTTCAGTGCTGCTCGTTATCCGAGGAAGCTGAATCCGCAACGGCCAAAGAGGATGAGTATTCGTGCGTGTCAGAGAATTTCAATCTTTGTGATGAGTTCTCAGCAGAAGATAAGGCCAAATCTGAGTCGTTCTTTCCGATTCCAAGTGATGTTCTGTTTGATTTTCAAGGTTCGTCGGATGTTTTTGACGGCATTGATAGCGTGCCGGAGAGCTTGTTCTTCGCCGATGATGATTTCCTTGCTGCAGGTTCATTCCTCACTTCTTGTGAGGATTTGGATTTTGGGTTCAAAAGTTGGCACAGAGAAGACGATTTCTTCCAAGATATTAGCGACCTTTTTGCTTCGGATCCGCTTGTTGCTCTTTGA 987 0.5218 MTTTTEPDPPPKLPYPRLVRITVTDTDVTDSSSDDEQETFRSRSSTRRHRQKKFVNEIVMEPCSSQNDGVVSRKRSRANKSTTTAGGKVRAPASRRQAKFSAGKKFRGVRQRPWGKWAAEIRDPSRRVRLWLGTYDTAEEAAMVYDNAAIKLRGPDALTNFITPPATATKTTTLDHKTTTVVINGYNSGDESQNTTTNNNLFSPTSVLQCCSLSEEAESATAKEDEYSCVSENFNLCDEFSAEDKAKSESFFPIPSDVLFDFQGSSDVFDGIDSVPESLFFADDDFLAAGSFLTSCEDLDFGFKSWHREDDFFQDISDLFASDPLVAL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1020 328 MobiDBLite consensus disorder prediction 1 51 - -
Aev05g1020 328 Pfam AP2 domain 105 154 IPR001471 GO:0003700|GO:0006355
Aev05g1020 328 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 13 325 - -
Aev05g1020 328 MobiDBLite consensus disorder prediction 65 88 - -
Aev05g1020 328 CDD AP2 104 161 IPR001471 GO:0003700|GO:0006355
Aev05g1020 328 SUPERFAMILY DNA-binding domain 105 161 IPR016177 GO:0003677
Aev05g1020 328 PRINTS Ethylene responsive element binding protein signature 106 117 IPR001471 GO:0003700|GO:0006355
Aev05g1020 328 PRINTS Ethylene responsive element binding protein signature 128 144 IPR001471 GO:0003700|GO:0006355
Aev05g1020 328 ProSiteProfiles AP2/ERF domain profile. 105 162 IPR001471 GO:0003700|GO:0006355
Aev05g1020 328 MobiDBLite consensus disorder prediction 65 95 - -
Aev05g1020 328 Gene3D AP2/ERF domain 104 163 IPR036955 GO:0003700|GO:0006355
Aev05g1020 328 SMART rav1_2 105 168 IPR001471 GO:0003700|GO:0006355
Aev05g1020 328 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-LIKE 13 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1020 Aev-Chr5 7185540 7186526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1020 17 328 AP2-EREBP Transcription Factor Family AT4G23750 44.282 9.36e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev05g1020 AP2 1.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1020 - - ahf:112801434 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1020 05 7185540 7186526 Aev03g3126 03 29892746 29893705 PCT