Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1002 ATGGCGGCGAGAGAGCTCGAAAACAAAGCGAAAGAAGCGTTCTTCGACGACGACTTCGTTGTGGCCGTTGATCTCTACTCTCAAGCCATCGAATTGGATCCCACCAATCCCAATCTCTATGCCGATAGGGCTCAAGCCCACATCAAGCTCGCCTCCTTCACCGAAGCAGTTTCTGATGCAAACAAAGCTATTCAATTGAGTCCCTCTTTAGCCAAGGCCTACCTCCGGAAAGGGACCGCTTGCATTAAGCTTGAAGAATATCATACTGCCAAGGTGGCACTGCAAACTGGTGCCTCTATTGCCCCCAATGACTCCAAATTCACCAATTTGATTCAGGAATGTGATCAACACATCGCAGAGGAATCAAATGGTCTTGGTACCACCTTGTCACCAACTGGGCCCGTAACGTCTGTGCCTACTGGTAGTAGCTCTTCCAATTTGAATGCTAAAAGTGCTGAGACAGTTAAAGAAGCTGAAAGAGACAGTTCGGTATCCAAAATCGATGAATCTGCATCAGTCAGACCAAAATACAGACATGAATACTACCAGAAGCCAGACGAAGTGGTTGTGACTATATTTGCAAAAGGAATACCAGCAGACAATGTGGTTGTTGACTTTGGTGAACAGATTCTAAGTGTTACTATTGATGTTCCTGGGCAAGAACCCTACCACTATCAACCTCGATTGTTTGGAAAGATAATTCCTGATAAGAGCAGAGTTGTTGTGTTGTCAACTAAAATTGAAATCCGTCTTGCAAAGGCTGAAGCTAGTAATTGGACATCTCTGGAATACAGCAAGGATATGCTTCCCCAAAAAATAAGTAAGCTGACAGTTCAACCTGAAAGGCCTTCATACCCATCATCAAAGCCAAGGACAAAAGATTGGGATAAGTTGGAAGCTCTAGTGAAAAAAGAGGAGAAAGAAGAGAAGCTAGACGGCGATGCTGCATTGAATAAATTGTTCCGTGATATTTACCAAAATGCAGACGAGGACATGAGGAGAGCGATGAGCAAGTCCTTTTTGGAGTCAAATGGAACAGTGTTGTCAACTGACTGGAAAGAAGTAGGATCAAAGAAGGTAGAAAGCAGTCCTCCAGAAGGCATGGAGTTGAGGAAATGGGAGTATTGA 1128 0.4424 MAARELENKAKEAFFDDDFVVAVDLYSQAIELDPTNPNLYADRAQAHIKLASFTEAVSDANKAIQLSPSLAKAYLRKGTACIKLEEYHTAKVALQTGASIAPNDSKFTNLIQECDQHIAEESNGLGTTLSPTGPVTSVPTGSSSSNLNAKSAETVKEAERDSSVSKIDESASVRPKYRHEYYQKPDEVVVTIFAKGIPADNVVVDFGEQILSVTIDVPGQEPYHYQPRLFGKIIPDKSRVVVLSTKIEIRLAKAEASNWTSLEYSKDMLPQKISKLTVQPERPSYPSSKPRTKDWDKLEALVKKEEKEEKLDGDAALNKLFRDIYQNADEDMRRAMSKSFLESNGTVLSTDWKEVGSKKVESSPPEGMELRKWEY* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1002 375 MobiDBLite consensus disorder prediction 153 167 - -
Aev05g1002 375 SUPERFAMILY HSP20-like chaperones 171 269 IPR008978 -
Aev05g1002 375 Pfam Tetratricopeptide repeat 39 69 IPR019734 GO:0005515
Aev05g1002 375 Pfam Tetratricopeptide repeat 71 104 IPR019734 GO:0005515
Aev05g1002 375 Pfam CS domain 178 253 IPR007052 -
Aev05g1002 375 Gene3D - 175 266 IPR008978 -
Aev05g1002 375 PANTHER PROTEIN SGT1 HOMOLOG 3 375 IPR044563 GO:0051087
Aev05g1002 375 Gene3D Tetratricopeptide repeat domain 1 124 IPR011990 GO:0005515
Aev05g1002 375 SUPERFAMILY TPR-like 3 114 IPR011990 GO:0005515
Aev05g1002 375 CDD p23_CS_SGT1_like 180 263 - -
Aev05g1002 375 PANTHER PROTEIN SGT1 HOMOLOG A 3 375 - -
Aev05g1002 375 ProSiteProfiles CS domain profile. 174 263 IPR007052 -
Aev05g1002 375 MobiDBLite consensus disorder prediction 354 375 - -
Aev05g1002 375 MobiDBLite consensus disorder prediction 353 375 - -
Aev05g1002 375 Pfam SGS domain 293 373 IPR007699 -
Aev05g1002 375 MobiDBLite consensus disorder prediction 123 152 - -
Aev05g1002 375 SMART tpr_5 71 104 IPR019734 GO:0005515
Aev05g1002 375 SMART tpr_5 3 36 IPR019734 GO:0005515
Aev05g1002 375 SMART tpr_5 37 70 IPR019734 GO:0005515
Aev05g1002 375 MobiDBLite consensus disorder prediction 123 167 - -
Aev05g1002 375 ProSiteProfiles TPR repeat profile. 37 70 IPR019734 GO:0005515
Aev05g1002 375 ProSiteProfiles SGS domain profile. 284 375 IPR007699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1002 Aev-Chr5 7038238 7040902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1002 3 113 U-box Gene Family AT3G07370 27.928 1.25e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1002 K12795 - gmx:100784022 509.605